Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
PrkdcP97313 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
PrkdcP97313 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PrkdcP97313 Gm12990-201ENSMUST00000120372 468 ntBASIC9.01□□□□□ -0.97
PrkdcP97313 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC9.01□□□□□ -0.97
PrkdcP97313 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
PrkdcP97313 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC9.01□□□□□ -0.97
PrkdcP97313 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
PrkdcP97313 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
PrkdcP97313 Gm7789-202ENSMUST00000211273 1400 ntBASIC9.01□□□□□ -0.97
PrkdcP97313 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
PrkdcP97313 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
PrkdcP97313 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
PrkdcP97313 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PrkdcP97313 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PrkdcP97313 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PrkdcP97313 Gm10774-201ENSMUST00000188689 204 ntBASIC9.01□□□□□ -0.97
PrkdcP97313 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PrkdcP97313 Gm2673-201ENSMUST00000120958 1608 ntBASIC9.01□□□□□ -0.97
PrkdcP97313 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
PrkdcP97313 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PrkdcP97313 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PrkdcP97313 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
PrkdcP97313 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PrkdcP97313 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
PrkdcP97313 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
PrkdcP97313 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PrkdcP97313 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PrkdcP97313 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
PrkdcP97313 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PrkdcP97313 Gm3793-201ENSMUST00000204973 672 ntBASIC9.01□□□□□ -0.97
PrkdcP97313 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC9.01□□□□□ -0.97
PrkdcP97313 Ginm1-202ENSMUST00000065124 300 ntBASIC9.01□□□□□ -0.97
PrkdcP97313 Gm7551-201ENSMUST00000089593 1074 ntBASIC9.01□□□□□ -0.97
PrkdcP97313 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC9.01□□□□□ -0.97
PrkdcP97313 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PrkdcP97313 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PrkdcP97313 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
PrkdcP97313 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PrkdcP97313 Gm9768-201ENSMUST00000206007 2861 ntBASIC9.01□□□□□ -0.97
PrkdcP97313 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PrkdcP97313 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
PrkdcP97313 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PrkdcP97313 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PrkdcP97313 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
PrkdcP97313 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
PrkdcP97313 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
PrkdcP97313 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC9□□□□□ -0.97
PrkdcP97313 Gm11470-201ENSMUST00000118868 1475 ntBASIC9□□□□□ -0.97
PrkdcP97313 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
PrkdcP97313 Gm11892-201ENSMUST00000117711 1202 ntBASIC9□□□□□ -0.97
PrkdcP97313 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC9□□□□□ -0.97
PrkdcP97313 Gm25604-201ENSMUST00000158359 133 ntBASIC9□□□□□ -0.97
PrkdcP97313 Gm27627-201ENSMUST00000183644 150 ntBASIC9□□□□□ -0.97
PrkdcP97313 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
PrkdcP97313 Gm38092-201ENSMUST00000195600 653 ntBASIC9□□□□□ -0.97
PrkdcP97313 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC9□□□□□ -0.97
PrkdcP97313 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC9□□□□□ -0.97
PrkdcP97313 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC9□□□□□ -0.97
PrkdcP97313 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
PrkdcP97313 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
PrkdcP97313 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
PrkdcP97313 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
PrkdcP97313 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
PrkdcP97313 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
PrkdcP97313 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC9□□□□□ -0.97
PrkdcP97313 Mir7686-201ENSMUST00000200604 57 ntBASIC9□□□□□ -0.97
PrkdcP97313 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC9□□□□□ -0.97
PrkdcP97313 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
PrkdcP97313 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC9□□□□□ -0.97
PrkdcP97313 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC9□□□□□ -0.97
PrkdcP97313 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
PrkdcP97313 AC159308.2-201ENSMUST00000213592 2325 ntBASIC9□□□□□ -0.97
PrkdcP97313 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
PrkdcP97313 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
PrkdcP97313 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC9□□□□□ -0.97
PrkdcP97313 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC9□□□□□ -0.97
PrkdcP97313 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC9□□□□□ -0.97
PrkdcP97313 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC9□□□□□ -0.97
PrkdcP97313 AC166051.1-201ENSMUST00000214313 210 ntBASIC9□□□□□ -0.97
PrkdcP97313 AC126799.1-201ENSMUST00000221976 246 ntBASIC9□□□□□ -0.97
PrkdcP97313 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
PrkdcP97313 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
PrkdcP97313 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
PrkdcP97313 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
PrkdcP97313 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC9□□□□□ -0.97
PrkdcP97313 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
PrkdcP97313 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC9□□□□□ -0.97
PrkdcP97313 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
PrkdcP97313 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
PrkdcP97313 Gm6039-201ENSMUST00000121667 1250 ntBASIC8.99□□□□□ -0.97
PrkdcP97313 Gm32999-201ENSMUST00000192693 562 ntBASIC8.99□□□□□ -0.97
PrkdcP97313 Gm44158-201ENSMUST00000203881 505 ntBASIC8.99□□□□□ -0.97
PrkdcP97313 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC8.99□□□□□ -0.97
PrkdcP97313 Gzmn-202ENSMUST00000225535 989 ntBASIC8.99□□□□□ -0.97
PrkdcP97313 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
PrkdcP97313 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
PrkdcP97313 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
PrkdcP97313 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
PrkdcP97313 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms