Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43bP86448 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Trim43bP86448 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trim43bP86448 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43bP86448 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43bP86448 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43bP86448 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43bP86448 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43bP86448 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43bP86448 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trim43bP86448 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43bP86448 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim43bP86448 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim43bP86448 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim43bP86448 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim43bP86448 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim43bP86448 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.02□□□□□ -0.16
Trim43bP86448 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim43bP86448 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim43bP86448 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim43bP86448 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trim43bP86448 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim43bP86448 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim43bP86448 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim43bP86448 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trim43bP86448 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim43bP86448 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim43bP86448 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.02□□□□□ -0.16
Trim43bP86448 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim43bP86448 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim43bP86448 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43bP86448 Gm24543-201ENSMUST00000103867 82 ntBASIC14.02□□□□□ -0.17
Trim43bP86448 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim43bP86448 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43bP86448 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43bP86448 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim43bP86448 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43bP86448 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.02□□□□□ -0.17
Trim43bP86448 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43bP86448 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.02□□□□□ -0.17
Trim43bP86448 Gm6888-201ENSMUST00000221983 706 ntBASIC14.02□□□□□ -0.17
Trim43bP86448 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43bP86448 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43bP86448 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.02□□□□□ -0.17
Trim43bP86448 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim43bP86448 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43bP86448 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43bP86448 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trim43bP86448 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trim43bP86448 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trim43bP86448 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43bP86448 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43bP86448 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43bP86448 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.01□□□□□ -0.17
Trim43bP86448 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43bP86448 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.01□□□□□ -0.17
Trim43bP86448 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43bP86448 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43bP86448 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trim43bP86448 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43bP86448 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43bP86448 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43bP86448 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43bP86448 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43bP86448 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.01□□□□□ -0.17
Trim43bP86448 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43bP86448 Gm13223-201ENSMUST00000118609 747 ntBASIC14.01□□□□□ -0.17
Trim43bP86448 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43bP86448 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trim43bP86448 Gm2445-201ENSMUST00000182798 989 ntBASIC14.01□□□□□ -0.17
Trim43bP86448 Gm27533-201ENSMUST00000183800 152 ntBASIC14.01□□□□□ -0.17
Trim43bP86448 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.01□□□□□ -0.17
Trim43bP86448 Gm29310-201ENSMUST00000185468 696 ntBASIC14.01□□□□□ -0.17
Trim43bP86448 Gm21825-201ENSMUST00000185728 696 ntBASIC14.01□□□□□ -0.17
Trim43bP86448 Gm29109-201ENSMUST00000185895 696 ntBASIC14.01□□□□□ -0.17
Trim43bP86448 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43bP86448 Gm21896-201ENSMUST00000186520 696 ntBASIC14.01□□□□□ -0.17
Trim43bP86448 Gm21873-201ENSMUST00000186728 696 ntBASIC14.01□□□□□ -0.17
Trim43bP86448 Gm21794-201ENSMUST00000187056 696 ntBASIC14.01□□□□□ -0.17
Trim43bP86448 Gm21880-201ENSMUST00000187275 696 ntBASIC14.01□□□□□ -0.17
Trim43bP86448 Gm21826-201ENSMUST00000187451 696 ntBASIC14.01□□□□□ -0.17
Trim43bP86448 Gm21198-201ENSMUST00000188393 696 ntBASIC14.01□□□□□ -0.17
Trim43bP86448 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.01□□□□□ -0.17
Trim43bP86448 Gm21749-201ENSMUST00000189343 696 ntBASIC14.01□□□□□ -0.17
Trim43bP86448 Gm21901-201ENSMUST00000189568 696 ntBASIC14.01□□□□□ -0.17
Trim43bP86448 Gm29424-201ENSMUST00000189716 696 ntBASIC14.01□□□□□ -0.17
Trim43bP86448 Gm28599-201ENSMUST00000189838 694 ntBASIC14.01□□□□□ -0.17
Trim43bP86448 Gm21867-201ENSMUST00000189917 696 ntBASIC14.01□□□□□ -0.17
Trim43bP86448 Gm29269-201ENSMUST00000190087 696 ntBASIC14.01□□□□□ -0.17
Trim43bP86448 Gm21722-201ENSMUST00000190153 696 ntBASIC14.01□□□□□ -0.17
Trim43bP86448 Gm28423-201ENSMUST00000190701 696 ntBASIC14.01□□□□□ -0.17
Trim43bP86448 Gm21899-201ENSMUST00000190745 696 ntBASIC14.01□□□□□ -0.17
Trim43bP86448 Gm21910-201ENSMUST00000191163 696 ntBASIC14.01□□□□□ -0.17
Trim43bP86448 Gm21849-201ENSMUST00000191571 696 ntBASIC14.01□□□□□ -0.17
Trim43bP86448 Gm28678-201ENSMUST00000191593 696 ntBASIC14.01□□□□□ -0.17
Trim43bP86448 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43bP86448 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43bP86448 Gm20910-201ENSMUST00000193268 696 ntBASIC14.01□□□□□ -0.17
Trim43bP86448 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43bP86448 Gm21871-201ENSMUST00000194621 696 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms