Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
H3f3aP84244 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.13□□□□□ -0.47
H3f3aP84244 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3aP84244 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3aP84244 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3aP84244 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.13□□□□□ -0.47
H3f3aP84244 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3aP84244 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3aP84244 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3aP84244 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3aP84244 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
H3f3aP84244 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
H3f3aP84244 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3aP84244 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
H3f3aP84244 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
H3f3aP84244 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
H3f3aP84244 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3aP84244 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3aP84244 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3aP84244 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3aP84244 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3aP84244 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3aP84244 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.12□□□□□ -0.47
H3f3aP84244 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
H3f3aP84244 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3aP84244 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3aP84244 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
H3f3aP84244 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3aP84244 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
H3f3aP84244 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.12□□□□□ -0.47
H3f3aP84244 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.12□□□□□ -0.47
H3f3aP84244 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.12□□□□□ -0.47
H3f3aP84244 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.12□□□□□ -0.47
H3f3aP84244 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.12□□□□□ -0.47
H3f3aP84244 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
H3f3aP84244 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
H3f3aP84244 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
H3f3aP84244 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3aP84244 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3aP84244 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3aP84244 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.12□□□□□ -0.47
H3f3aP84244 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.12□□□□□ -0.47
H3f3aP84244 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.12□□□□□ -0.47
H3f3aP84244 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3aP84244 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.12□□□□□ -0.47
H3f3aP84244 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3aP84244 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3aP84244 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3aP84244 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3aP84244 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3aP84244 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3aP84244 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3aP84244 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3aP84244 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
H3f3aP84244 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3aP84244 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3aP84244 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3aP84244 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H3f3aP84244 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
H3f3aP84244 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
H3f3aP84244 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H3f3aP84244 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.11□□□□□ -0.47
H3f3aP84244 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
H3f3aP84244 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
H3f3aP84244 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H3f3aP84244 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H3f3aP84244 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
H3f3aP84244 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H3f3aP84244 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
H3f3aP84244 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
H3f3aP84244 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
H3f3aP84244 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
H3f3aP84244 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H3f3aP84244 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H3f3aP84244 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H3f3aP84244 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.11□□□□□ -0.47
H3f3aP84244 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
H3f3aP84244 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.11□□□□□ -0.47
H3f3aP84244 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
H3f3aP84244 Gm15770-201ENSMUST00000117498 584 ntBASIC12.11□□□□□ -0.47
H3f3aP84244 Gm12485-201ENSMUST00000119641 291 ntBASIC12.11□□□□□ -0.47
H3f3aP84244 Gm15376-201ENSMUST00000122258 783 ntBASIC12.11□□□□□ -0.47
H3f3aP84244 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.11□□□□□ -0.47
H3f3aP84244 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
H3f3aP84244 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.11□□□□□ -0.47
H3f3aP84244 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
H3f3aP84244 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
H3f3aP84244 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.11□□□□□ -0.47
H3f3aP84244 Gm17330-201ENSMUST00000221047 165 ntBASIC12.11□□□□□ -0.47
H3f3aP84244 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H3f3aP84244 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
H3f3aP84244 Gm5161-201ENSMUST00000075243 853 ntBASIC12.11□□□□□ -0.47
H3f3aP84244 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H3f3aP84244 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
H3f3aP84244 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.11□□□□□ -0.47
H3f3aP84244 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H3f3aP84244 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H3f3aP84244 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
H3f3aP84244 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
H3f3aP84244 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms