Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shox2P70390 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shox2P70390 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shox2P70390 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shox2P70390 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Shox2P70390 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shox2P70390 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.44□□□□□ -0.26
Shox2P70390 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Shox2P70390 Gm15173-201ENSMUST00000122049 433 ntBASIC13.44□□□□□ -0.26
Shox2P70390 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.44□□□□□ -0.26
Shox2P70390 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Shox2P70390 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Shox2P70390 Gm18027-201ENSMUST00000218947 619 ntBASIC13.44□□□□□ -0.26
Shox2P70390 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shox2P70390 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shox2P70390 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shox2P70390 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Shox2P70390 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Shox2P70390 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shox2P70390 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shox2P70390 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shox2P70390 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shox2P70390 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Shox2P70390 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Shox2P70390 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shox2P70390 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shox2P70390 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.43□□□□□ -0.26
Shox2P70390 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Shox2P70390 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Shox2P70390 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shox2P70390 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shox2P70390 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.43□□□□□ -0.26
Shox2P70390 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Shox2P70390 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shox2P70390 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shox2P70390 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shox2P70390 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.43□□□□□ -0.26
Shox2P70390 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Shox2P70390 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.43□□□□□ -0.26
Shox2P70390 AA543401-201ENSMUST00000164248 1269 ntBASIC13.43□□□□□ -0.26
Shox2P70390 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Shox2P70390 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.43□□□□□ -0.26
Shox2P70390 Gm27741-201ENSMUST00000185060 237 ntBASIC13.43□□□□□ -0.26
Shox2P70390 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.43□□□□□ -0.26
Shox2P70390 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Shox2P70390 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.43□□□□□ -0.26
Shox2P70390 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.43□□□□□ -0.26
Shox2P70390 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shox2P70390 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shox2P70390 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shox2P70390 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Shox2P70390 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shox2P70390 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shox2P70390 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shox2P70390 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shox2P70390 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shox2P70390 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shox2P70390 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shox2P70390 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Shox2P70390 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shox2P70390 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Shox2P70390 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shox2P70390 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Shox2P70390 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Shox2P70390 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shox2P70390 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shox2P70390 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Shox2P70390 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shox2P70390 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Shox2P70390 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shox2P70390 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shox2P70390 Gm7284-201ENSMUST00000131667 944 ntBASIC13.42□□□□□ -0.26
Shox2P70390 Gm27301-201ENSMUST00000184012 127 ntBASIC13.42□□□□□ -0.26
Shox2P70390 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.42□□□□□ -0.26
Shox2P70390 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Shox2P70390 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shox2P70390 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.42□□□□□ -0.26
Shox2P70390 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shox2P70390 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shox2P70390 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shox2P70390 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shox2P70390 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Shox2P70390 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shox2P70390 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shox2P70390 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Shox2P70390 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Shox2P70390 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Shox2P70390 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shox2P70390 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.41□□□□□ -0.26
Shox2P70390 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shox2P70390 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Shox2P70390 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shox2P70390 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shox2P70390 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Shox2P70390 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shox2P70390 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Shox2P70390 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Shox2P70390 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shox2P70390 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.41□□□□□ -0.26
Shox2P70390 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms