Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC21.81■■□□□ 1.08
Cux2P70298 Gm13736-201ENSMUST00000119272 253 ntBASIC21.81■■□□□ 1.08
Cux2P70298 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Cux2P70298 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC21.81■■□□□ 1.08
Cux2P70298 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC21.81■■□□□ 1.08
Cux2P70298 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Cux2P70298 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC21.81■■□□□ 1.08
Cux2P70298 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC21.81■■□□□ 1.08
Cux2P70298 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC21.81■■□□□ 1.08
Cux2P70298 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cux2P70298 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cux2P70298 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cux2P70298 Gm10179-201ENSMUST00000086233 688 ntBASIC21.81■■□□□ 1.08
Cux2P70298 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Cux2P70298 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Cux2P70298 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cux2P70298 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cux2P70298 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Cux2P70298 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cux2P70298 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cux2P70298 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Cux2P70298 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cux2P70298 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Cux2P70298 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
Cux2P70298 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cux2P70298 Gm7789-202ENSMUST00000211273 1400 ntBASIC21.81■■□□□ 1.08
Cux2P70298 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Cux2P70298 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cux2P70298 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cux2P70298 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Cux2P70298 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Cux2P70298 Gm9540-201ENSMUST00000188230 478 ntBASIC21.8■■□□□ 1.08
Cux2P70298 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC21.8■■□□□ 1.08
Cux2P70298 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC21.8■■□□□ 1.08
Cux2P70298 AC159819.2-201ENSMUST00000216151 342 ntBASIC21.8■■□□□ 1.08
Cux2P70298 AC154222.2-201ENSMUST00000225848 607 ntBASIC21.8■■□□□ 1.08
Cux2P70298 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cux2P70298 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cux2P70298 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cux2P70298 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cux2P70298 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cux2P70298 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cux2P70298 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Cux2P70298 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cux2P70298 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cux2P70298 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC21.8■■□□□ 1.08
Cux2P70298 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC21.8■■□□□ 1.08
Cux2P70298 Gm38297-201ENSMUST00000195122 1057 ntBASIC21.8■■□□□ 1.08
Cux2P70298 AC107638.1-201ENSMUST00000213690 1061 ntBASIC21.8■■□□□ 1.08
Cux2P70298 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cux2P70298 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cux2P70298 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cux2P70298 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Cux2P70298 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Cux2P70298 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cux2P70298 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Cux2P70298 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cux2P70298 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cux2P70298 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Cux2P70298 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Cux2P70298 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cux2P70298 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Cux2P70298 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Cux2P70298 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
Cux2P70298 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cux2P70298 Gm12134-201ENSMUST00000122109 520 ntBASIC21.79■■□□□ 1.08
Cux2P70298 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Cux2P70298 Mir6958-201ENSMUST00000184207 73 ntBASIC21.79■■□□□ 1.08
Cux2P70298 Gm19353-201ENSMUST00000184561 445 ntBASIC21.79■■□□□ 1.08
Cux2P70298 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC21.79■■□□□ 1.08
Cux2P70298 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cux2P70298 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cux2P70298 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC21.79■■□□□ 1.08
Cux2P70298 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cux2P70298 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cux2P70298 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cux2P70298 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cux2P70298 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cux2P70298 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cux2P70298 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
Cux2P70298 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cux2P70298 Gm24845-201ENSMUST00000158034 109 ntBASIC21.78■■□□□ 1.08
Cux2P70298 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC21.78■■□□□ 1.08
Cux2P70298 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC21.78■■□□□ 1.08
Cux2P70298 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Cux2P70298 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cux2P70298 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cux2P70298 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cux2P70298 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cux2P70298 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC21.78■■□□□ 1.08
Cux2P70298 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cux2P70298 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cux2P70298 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cux2P70298 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Cux2P70298 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cux2P70298 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cux2P70298 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cux2P70298 Gm9856-201ENSMUST00000217077 2578 ntBASIC21.77■■□□□ 1.08
Cux2P70298 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Cux2P70298 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms