Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim4P70271 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim4P70271 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim4P70271 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Pdlim4P70271 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim4P70271 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.36□□□□□ -0.59
Pdlim4P70271 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim4P70271 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim4P70271 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim4P70271 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim4P70271 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Pdlim4P70271 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim4P70271 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim4P70271 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.35□□□□□ -0.59
Pdlim4P70271 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim4P70271 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim4P70271 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.35□□□□□ -0.59
Pdlim4P70271 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim4P70271 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim4P70271 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim4P70271 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim4P70271 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Pdlim4P70271 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim4P70271 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim4P70271 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.35□□□□□ -0.59
Pdlim4P70271 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.35□□□□□ -0.59
Pdlim4P70271 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim4P70271 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim4P70271 Gm16215-201ENSMUST00000161990 637 ntBASIC11.35□□□□□ -0.59
Pdlim4P70271 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Pdlim4P70271 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Pdlim4P70271 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.35□□□□□ -0.59
Pdlim4P70271 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Pdlim4P70271 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.35□□□□□ -0.59
Pdlim4P70271 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim4P70271 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Pdlim4P70271 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.35□□□□□ -0.59
Pdlim4P70271 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Pdlim4P70271 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim4P70271 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim4P70271 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.35□□□□□ -0.59
Pdlim4P70271 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim4P70271 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Pdlim4P70271 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.35□□□□□ -0.59
Pdlim4P70271 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim4P70271 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim4P70271 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.35□□□□□ -0.59
Pdlim4P70271 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim4P70271 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim4P70271 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim4P70271 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim4P70271 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim4P70271 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC11.34□□□□□ -0.59
Pdlim4P70271 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim4P70271 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.34□□□□□ -0.59
Pdlim4P70271 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim4P70271 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim4P70271 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Pdlim4P70271 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim4P70271 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.34□□□□□ -0.59
Pdlim4P70271 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.34□□□□□ -0.59
Pdlim4P70271 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim4P70271 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim4P70271 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim4P70271 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim4P70271 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.34□□□□□ -0.59
Pdlim4P70271 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim4P70271 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim4P70271 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Pdlim4P70271 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim4P70271 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Pdlim4P70271 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.34□□□□□ -0.59
Pdlim4P70271 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim4P70271 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim4P70271 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim4P70271 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.34□□□□□ -0.59
Pdlim4P70271 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.34□□□□□ -0.59
Pdlim4P70271 Gm8927-201ENSMUST00000181978 981 ntBASIC11.34□□□□□ -0.59
Pdlim4P70271 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.34□□□□□ -0.59
Pdlim4P70271 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim4P70271 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.34□□□□□ -0.59
Pdlim4P70271 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim4P70271 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim4P70271 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim4P70271 Gm7730-201ENSMUST00000212486 454 ntBASIC11.34□□□□□ -0.59
Pdlim4P70271 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.34□□□□□ -0.59
Pdlim4P70271 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.34□□□□□ -0.59
Pdlim4P70271 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim4P70271 Gm3222-201ENSMUST00000071282 990 ntBASIC11.34□□□□□ -0.59
Pdlim4P70271 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim4P70271 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim4P70271 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim4P70271 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim4P70271 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Pdlim4P70271 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim4P70271 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim4P70271 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim4P70271 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim4P70271 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim4P70271 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms