Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ybx1P62960 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ybx1P62960 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ybx1P62960 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.92□□□□□ -0.18
Ybx1P62960 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.92□□□□□ -0.18
Ybx1P62960 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ybx1P62960 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ybx1P62960 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ybx1P62960 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ybx1P62960 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ybx1P62960 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ybx1P62960 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ybx1P62960 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.91□□□□□ -0.18
Ybx1P62960 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ybx1P62960 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ybx1P62960 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ybx1P62960 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ybx1P62960 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ybx1P62960 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ybx1P62960 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ybx1P62960 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.91□□□□□ -0.18
Ybx1P62960 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ybx1P62960 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ybx1P62960 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ybx1P62960 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ybx1P62960 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ybx1P62960 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ybx1P62960 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ybx1P62960 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ybx1P62960 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ybx1P62960 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ybx1P62960 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.91□□□□□ -0.18
Ybx1P62960 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ybx1P62960 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ybx1P62960 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.91□□□□□ -0.18
Ybx1P62960 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.91□□□□□ -0.18
Ybx1P62960 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.91□□□□□ -0.18
Ybx1P62960 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.91□□□□□ -0.18
Ybx1P62960 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.91□□□□□ -0.18
Ybx1P62960 Gm12403-201ENSMUST00000121384 959 ntBASIC13.91□□□□□ -0.18
Ybx1P62960 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ybx1P62960 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.91□□□□□ -0.18
Ybx1P62960 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.91□□□□□ -0.18
Ybx1P62960 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.91□□□□□ -0.18
Ybx1P62960 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.91□□□□□ -0.18
Ybx1P62960 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.91□□□□□ -0.18
Ybx1P62960 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ybx1P62960 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ybx1P62960 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ybx1P62960 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ybx1P62960 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ybx1P62960 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Ybx1P62960 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ybx1P62960 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.91□□□□□ -0.18
Ybx1P62960 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ybx1P62960 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ybx1P62960 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ybx1P62960 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ybx1P62960 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ybx1P62960 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ybx1P62960 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ybx1P62960 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ybx1P62960 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ybx1P62960 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ybx1P62960 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ybx1P62960 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ybx1P62960 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.9□□□□□ -0.18
Ybx1P62960 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ybx1P62960 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Ybx1P62960 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Ybx1P62960 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.9□□□□□ -0.18
Ybx1P62960 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ybx1P62960 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ybx1P62960 Gm4271-201ENSMUST00000174444 973 ntBASIC13.9□□□□□ -0.18
Ybx1P62960 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.9□□□□□ -0.18
Ybx1P62960 Gm45930-201ENSMUST00000221330 292 ntBASIC13.9□□□□□ -0.18
Ybx1P62960 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.9□□□□□ -0.18
Ybx1P62960 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ybx1P62960 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ybx1P62960 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ybx1P62960 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.9□□□□□ -0.18
Ybx1P62960 Gm26315-201ENSMUST00000083890 321 ntBASIC13.9□□□□□ -0.18
Ybx1P62960 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.9□□□□□ -0.18
Ybx1P62960 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ybx1P62960 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Ybx1P62960 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ybx1P62960 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Ybx1P62960 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.9□□□□□ -0.18
Ybx1P62960 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.9□□□□□ -0.18
Ybx1P62960 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Ybx1P62960 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.9□□□□□ -0.18
Ybx1P62960 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.9□□□□□ -0.18
Ybx1P62960 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Ybx1P62960 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.19
Ybx1P62960 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Ybx1P62960 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.9□□□□□ -0.19
Ybx1P62960 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ybx1P62960 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ybx1P62960 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ybx1P62960 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms