Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Lsm5P62322 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Lsm5P62322 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm5P62322 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm5P62322 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Lsm5P62322 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Lsm5P62322 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm5P62322 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm5P62322 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm5P62322 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm5P62322 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC11.32□□□□□ -0.6
Lsm5P62322 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm5P62322 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm5P62322 Gm6184-201ENSMUST00000120403 1261 ntBASIC11.32□□□□□ -0.6
Lsm5P62322 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC11.32□□□□□ -0.6
Lsm5P62322 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm5P62322 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm5P62322 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Lsm5P62322 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm5P62322 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm5P62322 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm5P62322 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Lsm5P62322 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm5P62322 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm5P62322 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm5P62322 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm5P62322 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm5P62322 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm5P62322 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm5P62322 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm5P62322 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm5P62322 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Lsm5P62322 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm5P62322 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC11.32□□□□□ -0.6
Lsm5P62322 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm5P62322 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.32□□□□□ -0.6
Lsm5P62322 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm5P62322 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm5P62322 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm5P62322 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm5P62322 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm5P62322 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm5P62322 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm5P62322 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm5P62322 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Lsm5P62322 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm5P62322 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm5P62322 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm5P62322 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm5P62322 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC11.31□□□□□ -0.6
Lsm5P62322 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm5P62322 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm5P62322 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm5P62322 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm5P62322 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.31□□□□□ -0.6
Lsm5P62322 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm5P62322 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Lsm5P62322 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm5P62322 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11.31□□□□□ -0.6
Lsm5P62322 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Lsm5P62322 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Lsm5P62322 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC11.31□□□□□ -0.6
Lsm5P62322 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Lsm5P62322 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm5P62322 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm5P62322 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Lsm5P62322 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm5P62322 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Lsm5P62322 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC11.31□□□□□ -0.6
Lsm5P62322 Gm27300-201ENSMUST00000184085 97 ntBASIC11.31□□□□□ -0.6
Lsm5P62322 Gm27335-201ENSMUST00000184758 97 ntBASIC11.31□□□□□ -0.6
Lsm5P62322 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm5P62322 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.31□□□□□ -0.6
Lsm5P62322 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC11.31□□□□□ -0.6
Lsm5P62322 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm5P62322 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm5P62322 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm5P62322 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm5P62322 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm5P62322 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC11.31□□□□□ -0.6
Lsm5P62322 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm5P62322 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm5P62322 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm5P62322 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm5P62322 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm5P62322 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.31□□□□□ -0.6
Lsm5P62322 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm5P62322 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm5P62322 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Lsm5P62322 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.31□□□□□ -0.6
Lsm5P62322 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Lsm5P62322 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm5P62322 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm5P62322 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Lsm5P62322 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.3□□□□□ -0.6
Lsm5P62322 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Lsm5P62322 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm5P62322 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm5P62322 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm5P62322 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms