Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm20553-201ENSMUST00000204205 844 ntBASIC12.09□□□□□ -0.47
Sf3b6P59708 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Sf3b6P59708 Gm45612-201ENSMUST00000211320 160 ntBASIC12.09□□□□□ -0.47
Sf3b6P59708 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.09□□□□□ -0.47
Sf3b6P59708 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3b6P59708 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3b6P59708 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3b6P59708 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3b6P59708 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Sf3b6P59708 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Sf3b6P59708 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3b6P59708 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.09□□□□□ -0.47
Sf3b6P59708 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3b6P59708 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3b6P59708 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3b6P59708 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Sf3b6P59708 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Sf3b6P59708 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Sf3b6P59708 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Sf3b6P59708 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3b6P59708 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3b6P59708 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.08□□□□□ -0.48
Sf3b6P59708 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3b6P59708 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3b6P59708 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3b6P59708 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3b6P59708 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3b6P59708 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.08□□□□□ -0.48
Sf3b6P59708 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.08□□□□□ -0.48
Sf3b6P59708 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.08□□□□□ -0.48
Sf3b6P59708 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3b6P59708 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3b6P59708 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3b6P59708 Rprl2-201ENSMUST00000157150 290 ntBASIC12.08□□□□□ -0.48
Sf3b6P59708 Gm26308-201ENSMUST00000157768 69 ntBASIC12.08□□□□□ -0.48
Sf3b6P59708 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.08□□□□□ -0.48
Sf3b6P59708 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.08□□□□□ -0.48
Sf3b6P59708 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.08□□□□□ -0.48
Sf3b6P59708 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3b6P59708 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3b6P59708 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3b6P59708 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3b6P59708 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.08□□□□□ -0.48
Sf3b6P59708 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3b6P59708 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3b6P59708 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3b6P59708 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.08□□□□□ -0.48
Sf3b6P59708 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3b6P59708 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Sf3b6P59708 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3b6P59708 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3b6P59708 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3b6P59708 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3b6P59708 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3b6P59708 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.08□□□□□ -0.48
Sf3b6P59708 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.08□□□□□ -0.48
Sf3b6P59708 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Sf3b6P59708 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sf3b6P59708 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Sf3b6P59708 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Sf3b6P59708 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3b6P59708 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.07□□□□□ -0.48
Sf3b6P59708 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3b6P59708 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3b6P59708 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3b6P59708 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3b6P59708 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3b6P59708 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3b6P59708 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3b6P59708 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3b6P59708 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3b6P59708 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3b6P59708 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
Sf3b6P59708 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3b6P59708 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3b6P59708 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3b6P59708 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3b6P59708 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3b6P59708 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3b6P59708 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Sf3b6P59708 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.07□□□□□ -0.48
Sf3b6P59708 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3b6P59708 Gm15678-201ENSMUST00000117573 960 ntBASIC12.07□□□□□ -0.48
Sf3b6P59708 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.07□□□□□ -0.48
Sf3b6P59708 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3b6P59708 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.07□□□□□ -0.48
Sf3b6P59708 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.07□□□□□ -0.48
Sf3b6P59708 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3b6P59708 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC12.07□□□□□ -0.48
Sf3b6P59708 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3b6P59708 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3b6P59708 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.07□□□□□ -0.48
Sf3b6P59708 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3b6P59708 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3b6P59708 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sf3b6P59708 Mir497b-201ENSMUST00000093601 125 ntBASIC12.07□□□□□ -0.48
Sf3b6P59708 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.07□□□□□ -0.48
Sf3b6P59708 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sf3b6P59708 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.07□□□□□ -0.48
Sf3b6P59708 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms