Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup43P59235 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.86□□□□□ -0.35
Nup43P59235 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.86□□□□□ -0.35
Nup43P59235 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup43P59235 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup43P59235 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Nup43P59235 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Nup43P59235 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup43P59235 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup43P59235 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup43P59235 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nup43P59235 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Nup43P59235 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Nup43P59235 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.86□□□□□ -0.35
Nup43P59235 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.86□□□□□ -0.35
Nup43P59235 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.86□□□□□ -0.35
Nup43P59235 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.86□□□□□ -0.35
Nup43P59235 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nup43P59235 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.86□□□□□ -0.35
Nup43P59235 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup43P59235 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nup43P59235 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup43P59235 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Nup43P59235 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup43P59235 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nup43P59235 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup43P59235 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup43P59235 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup43P59235 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup43P59235 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup43P59235 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Nup43P59235 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup43P59235 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup43P59235 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup43P59235 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Nup43P59235 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup43P59235 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nup43P59235 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.86□□□□□ -0.35
Nup43P59235 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup43P59235 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Nup43P59235 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Nup43P59235 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup43P59235 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup43P59235 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Nup43P59235 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup43P59235 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup43P59235 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup43P59235 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Nup43P59235 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup43P59235 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup43P59235 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Nup43P59235 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup43P59235 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup43P59235 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nup43P59235 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup43P59235 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Nup43P59235 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.85□□□□□ -0.35
Nup43P59235 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Nup43P59235 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nup43P59235 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Nup43P59235 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Nup43P59235 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nup43P59235 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Nup43P59235 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup43P59235 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.85□□□□□ -0.35
Nup43P59235 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nup43P59235 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nup43P59235 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.85□□□□□ -0.35
Nup43P59235 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.85□□□□□ -0.35
Nup43P59235 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup43P59235 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup43P59235 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Nup43P59235 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Nup43P59235 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Nup43P59235 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.85□□□□□ -0.35
Nup43P59235 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup43P59235 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup43P59235 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Nup43P59235 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup43P59235 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.85□□□□□ -0.35
Nup43P59235 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.85□□□□□ -0.35
Nup43P59235 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.85□□□□□ -0.35
Nup43P59235 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup43P59235 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.85□□□□□ -0.35
Nup43P59235 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.85□□□□□ -0.35
Nup43P59235 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nup43P59235 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup43P59235 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup43P59235 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup43P59235 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup43P59235 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup43P59235 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup43P59235 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.85□□□□□ -0.35
Nup43P59235 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup43P59235 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup43P59235 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup43P59235 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup43P59235 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Nup43P59235 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup43P59235 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms