Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm1P58771 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm1P58771 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm1P58771 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm1P58771 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm1P58771 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm1P58771 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm1P58771 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm1P58771 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm1P58771 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Tpm1P58771 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Tpm1P58771 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm1P58771 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm1P58771 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.17■□□□□ 0.02
Tpm1P58771 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Tpm1P58771 Gm29310-201ENSMUST00000185468 696 ntBASIC15.17■□□□□ 0.02
Tpm1P58771 Gm21825-201ENSMUST00000185728 696 ntBASIC15.17■□□□□ 0.02
Tpm1P58771 Gm29109-201ENSMUST00000185895 696 ntBASIC15.17■□□□□ 0.02
Tpm1P58771 Gm21896-201ENSMUST00000186520 696 ntBASIC15.17■□□□□ 0.02
Tpm1P58771 Gm21873-201ENSMUST00000186728 696 ntBASIC15.17■□□□□ 0.02
Tpm1P58771 Gm21794-201ENSMUST00000187056 696 ntBASIC15.17■□□□□ 0.02
Tpm1P58771 Gm21880-201ENSMUST00000187275 696 ntBASIC15.17■□□□□ 0.02
Tpm1P58771 Gm21826-201ENSMUST00000187451 696 ntBASIC15.17■□□□□ 0.02
Tpm1P58771 Gm21198-201ENSMUST00000188393 696 ntBASIC15.17■□□□□ 0.02
Tpm1P58771 Gm21749-201ENSMUST00000189343 696 ntBASIC15.17■□□□□ 0.02
Tpm1P58771 Gm21901-201ENSMUST00000189568 696 ntBASIC15.17■□□□□ 0.02
Tpm1P58771 Gm29424-201ENSMUST00000189716 696 ntBASIC15.17■□□□□ 0.02
Tpm1P58771 Gm28599-201ENSMUST00000189838 694 ntBASIC15.17■□□□□ 0.02
Tpm1P58771 Gm21867-201ENSMUST00000189917 696 ntBASIC15.17■□□□□ 0.02
Tpm1P58771 Gm29269-201ENSMUST00000190087 696 ntBASIC15.17■□□□□ 0.02
Tpm1P58771 Gm21722-201ENSMUST00000190153 696 ntBASIC15.17■□□□□ 0.02
Tpm1P58771 Gm28423-201ENSMUST00000190701 696 ntBASIC15.17■□□□□ 0.02
Tpm1P58771 Gm21899-201ENSMUST00000190745 696 ntBASIC15.17■□□□□ 0.02
Tpm1P58771 Gm21910-201ENSMUST00000191163 696 ntBASIC15.17■□□□□ 0.02
Tpm1P58771 Gm21849-201ENSMUST00000191571 696 ntBASIC15.17■□□□□ 0.02
Tpm1P58771 Gm28678-201ENSMUST00000191593 696 ntBASIC15.17■□□□□ 0.02
Tpm1P58771 Gm20910-201ENSMUST00000193268 696 ntBASIC15.17■□□□□ 0.02
Tpm1P58771 Gm21871-201ENSMUST00000194621 696 ntBASIC15.17■□□□□ 0.02
Tpm1P58771 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC15.17■□□□□ 0.02
Tpm1P58771 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm1P58771 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm1P58771 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm1P58771 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.17■□□□□ 0.02
Tpm1P58771 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Tpm1P58771 Gm10819-201ENSMUST00000099988 561 ntBASIC15.17■□□□□ 0.02
Tpm1P58771 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Tpm1P58771 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm1P58771 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Tpm1P58771 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm1P58771 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm1P58771 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm1P58771 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm1P58771 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Tpm1P58771 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tpm1P58771 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Tpm1P58771 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tpm1P58771 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Tpm1P58771 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tpm1P58771 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tpm1P58771 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tpm1P58771 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tpm1P58771 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Tpm1P58771 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Tpm1P58771 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tpm1P58771 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tpm1P58771 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tpm1P58771 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tpm1P58771 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.16■□□□□ 0.02
Tpm1P58771 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tpm1P58771 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Tpm1P58771 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Tpm1P58771 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Tpm1P58771 Gm11025-201ENSMUST00000140773 466 ntBASIC15.16■□□□□ 0.02
Tpm1P58771 Mir8117-201ENSMUST00000184773 107 ntBASIC15.16■□□□□ 0.02
Tpm1P58771 Gm38225-201ENSMUST00000194001 393 ntBASIC15.16■□□□□ 0.02
Tpm1P58771 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Tpm1P58771 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tpm1P58771 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tpm1P58771 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tpm1P58771 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.16■□□□□ 0.02
Tpm1P58771 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tpm1P58771 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Tpm1P58771 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tpm1P58771 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC15.16■□□□□ 0.02
Tpm1P58771 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tpm1P58771 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tpm1P58771 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tpm1P58771 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm1P58771 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Tpm1P58771 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
Tpm1P58771 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Tpm1P58771 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm1P58771 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm1P58771 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm1P58771 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Tpm1P58771 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm1P58771 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm1P58771 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm1P58771 Gm42480-201ENSMUST00000198434 2595 ntBASIC15.15■□□□□ 0.02
Tpm1P58771 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms