Protein–RNA interactions for Protein: P54754

Ephb3, Ephrin type-B receptor 3, mousemouse

Known RBP Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ephb3P54754 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ephb3P54754 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.21□□□□□ -0.13
Ephb3P54754 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ephb3P54754 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ephb3P54754 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.21□□□□□ -0.14
Ephb3P54754 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ephb3P54754 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ephb3P54754 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ephb3P54754 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ephb3P54754 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Ephb3P54754 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.2□□□□□ -0.14
Ephb3P54754 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ephb3P54754 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ephb3P54754 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ephb3P54754 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ephb3P54754 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.2□□□□□ -0.14
Ephb3P54754 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ephb3P54754 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ephb3P54754 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ephb3P54754 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ephb3P54754 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ephb3P54754 Gm13123-201ENSMUST00000122173 492 ntBASIC14.2□□□□□ -0.14
Ephb3P54754 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC14.2□□□□□ -0.14
Ephb3P54754 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC14.2□□□□□ -0.14
Ephb3P54754 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC14.2□□□□□ -0.14
Ephb3P54754 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.2□□□□□ -0.14
Ephb3P54754 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.2□□□□□ -0.14
Ephb3P54754 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.2□□□□□ -0.14
Ephb3P54754 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.2□□□□□ -0.14
Ephb3P54754 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC14.2□□□□□ -0.14
Ephb3P54754 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ephb3P54754 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.2□□□□□ -0.14
Ephb3P54754 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ephb3P54754 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ephb3P54754 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.2□□□□□ -0.14
Ephb3P54754 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ephb3P54754 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ephb3P54754 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.2□□□□□ -0.14
Ephb3P54754 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ephb3P54754 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ephb3P54754 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ephb3P54754 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ephb3P54754 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.2□□□□□ -0.14
Ephb3P54754 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ephb3P54754 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ephb3P54754 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ephb3P54754 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ephb3P54754 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ephb3P54754 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ephb3P54754 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ephb3P54754 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ephb3P54754 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ephb3P54754 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ephb3P54754 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ephb3P54754 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ephb3P54754 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ephb3P54754 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ephb3P54754 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ephb3P54754 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ephb3P54754 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ephb3P54754 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ephb3P54754 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC14.19□□□□□ -0.14
Ephb3P54754 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ephb3P54754 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ephb3P54754 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ephb3P54754 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ephb3P54754 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.19□□□□□ -0.14
Ephb3P54754 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ephb3P54754 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Ephb3P54754 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC14.19□□□□□ -0.14
Ephb3P54754 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ephb3P54754 Gm16379-201ENSMUST00000161469 348 ntBASIC14.19□□□□□ -0.14
Ephb3P54754 Gm8762-201ENSMUST00000193486 339 ntBASIC14.19□□□□□ -0.14
Ephb3P54754 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.19□□□□□ -0.14
Ephb3P54754 Gm17330-201ENSMUST00000221047 165 ntBASIC14.19□□□□□ -0.14
Ephb3P54754 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ephb3P54754 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ephb3P54754 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ephb3P54754 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ephb3P54754 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ephb3P54754 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ephb3P54754 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ephb3P54754 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ephb3P54754 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ephb3P54754 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ephb3P54754 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.19□□□□□ -0.14
Ephb3P54754 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ephb3P54754 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.18□□□□□ -0.14
Ephb3P54754 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ephb3P54754 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ephb3P54754 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ephb3P54754 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ephb3P54754 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ephb3P54754 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ephb3P54754 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Ephb3P54754 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ephb3P54754 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ephb3P54754 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ephb3P54754 Gm15770-201ENSMUST00000117498 584 ntBASIC14.18□□□□□ -0.14
Ephb3P54754 Gm13297-201ENSMUST00000120205 934 ntBASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms