Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Msh6P54276 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Msh6P54276 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC17.13■□□□□ 0.33
Msh6P54276 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Msh6P54276 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msh6P54276 Gm16570-201ENSMUST00000161951 436 ntBASIC17.13■□□□□ 0.33
Msh6P54276 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC17.13■□□□□ 0.33
Msh6P54276 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC17.13■□□□□ 0.33
Msh6P54276 Gm6334-201ENSMUST00000207083 228 ntBASIC17.13■□□□□ 0.33
Msh6P54276 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC17.13■□□□□ 0.33
Msh6P54276 AC093022.1-201ENSMUST00000226949 1072 ntBASIC17.13■□□□□ 0.33
Msh6P54276 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Msh6P54276 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.13■□□□□ 0.33
Msh6P54276 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Msh6P54276 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msh6P54276 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC17.12■□□□□ 0.33
Msh6P54276 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msh6P54276 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msh6P54276 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC17.12■□□□□ 0.33
Msh6P54276 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msh6P54276 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msh6P54276 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msh6P54276 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Msh6P54276 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Msh6P54276 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msh6P54276 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msh6P54276 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msh6P54276 Gm11618-201ENSMUST00000117946 267 ntBASIC17.12■□□□□ 0.33
Msh6P54276 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC17.12■□□□□ 0.33
Msh6P54276 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC17.12■□□□□ 0.33
Msh6P54276 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC17.12■□□□□ 0.33
Msh6P54276 Gm38158-201ENSMUST00000194617 339 ntBASIC17.12■□□□□ 0.33
Msh6P54276 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC17.12■□□□□ 0.33
Msh6P54276 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msh6P54276 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msh6P54276 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msh6P54276 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Msh6P54276 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msh6P54276 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msh6P54276 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Msh6P54276 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msh6P54276 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msh6P54276 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.12■□□□□ 0.33
Msh6P54276 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msh6P54276 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Msh6P54276 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msh6P54276 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Msh6P54276 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Msh6P54276 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Msh6P54276 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msh6P54276 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msh6P54276 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msh6P54276 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Msh6P54276 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Msh6P54276 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msh6P54276 Gm12241-201ENSMUST00000118330 726 ntBASIC17.11■□□□□ 0.33
Msh6P54276 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msh6P54276 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Msh6P54276 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Msh6P54276 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC17.11■□□□□ 0.33
Msh6P54276 Gm10146-201ENSMUST00000072739 309 ntBASIC17.11■□□□□ 0.33
Msh6P54276 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msh6P54276 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msh6P54276 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msh6P54276 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Msh6P54276 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msh6P54276 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Msh6P54276 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Msh6P54276 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Msh6P54276 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Msh6P54276 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msh6P54276 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Msh6P54276 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Msh6P54276 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msh6P54276 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msh6P54276 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Msh6P54276 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.1■□□□□ 0.33
Msh6P54276 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msh6P54276 Gm45684-201ENSMUST00000210244 1571 ntBASIC17.1■□□□□ 0.33
Msh6P54276 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msh6P54276 Mir877-201ENSMUST00000104738 85 ntBASIC17.1■□□□□ 0.33
Msh6P54276 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC17.1■□□□□ 0.33
Msh6P54276 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Msh6P54276 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Msh6P54276 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC17.1■□□□□ 0.33
Msh6P54276 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Msh6P54276 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Msh6P54276 Gm8227-201ENSMUST00000223306 571 ntBASIC17.1■□□□□ 0.33
Msh6P54276 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Msh6P54276 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msh6P54276 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msh6P54276 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msh6P54276 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msh6P54276 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msh6P54276 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msh6P54276 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msh6P54276 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Msh6P54276 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msh6P54276 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msh6P54276 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms