Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Atxn1P54254 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Atxn1P54254 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atxn1P54254 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Atxn1P54254 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Atxn1P54254 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atxn1P54254 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atxn1P54254 Gm22018-201ENSMUST00000104357 131 ntBASIC13.51□□□□□ -0.25
Atxn1P54254 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Atxn1P54254 Gm15376-201ENSMUST00000122258 783 ntBASIC13.51□□□□□ -0.25
Atxn1P54254 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Atxn1P54254 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Atxn1P54254 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.51□□□□□ -0.25
Atxn1P54254 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.51□□□□□ -0.25
Atxn1P54254 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atxn1P54254 Gm37008-201ENSMUST00000195712 319 ntBASIC13.51□□□□□ -0.25
Atxn1P54254 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC13.51□□□□□ -0.25
Atxn1P54254 Gm6983-201ENSMUST00000214912 628 ntBASIC13.51□□□□□ -0.25
Atxn1P54254 Cts7-204ENSMUST00000225321 1257 ntBASIC13.51□□□□□ -0.25
Atxn1P54254 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.51□□□□□ -0.25
Atxn1P54254 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atxn1P54254 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atxn1P54254 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atxn1P54254 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atxn1P54254 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atxn1P54254 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atxn1P54254 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atxn1P54254 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.51□□□□□ -0.25
Atxn1P54254 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Atxn1P54254 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atxn1P54254 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atxn1P54254 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atxn1P54254 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atxn1P54254 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atxn1P54254 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atxn1P54254 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.5□□□□□ -0.25
Atxn1P54254 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.5□□□□□ -0.25
Atxn1P54254 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atxn1P54254 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atxn1P54254 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Atxn1P54254 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.5□□□□□ -0.25
Atxn1P54254 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atxn1P54254 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atxn1P54254 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atxn1P54254 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atxn1P54254 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Atxn1P54254 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Atxn1P54254 Gm11803-201ENSMUST00000119966 444 ntBASIC13.5□□□□□ -0.25
Atxn1P54254 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.5□□□□□ -0.25
Atxn1P54254 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC13.5□□□□□ -0.25
Atxn1P54254 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Atxn1P54254 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Atxn1P54254 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.5□□□□□ -0.25
Atxn1P54254 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.5□□□□□ -0.25
Atxn1P54254 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC13.5□□□□□ -0.25
Atxn1P54254 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.5□□□□□ -0.25
Atxn1P54254 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atxn1P54254 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atxn1P54254 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Atxn1P54254 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Atxn1P54254 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atxn1P54254 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.5□□□□□ -0.25
Atxn1P54254 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atxn1P54254 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atxn1P54254 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Atxn1P54254 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
Atxn1P54254 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atxn1P54254 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atxn1P54254 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atxn1P54254 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Atxn1P54254 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Atxn1P54254 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Atxn1P54254 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atxn1P54254 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.49□□□□□ -0.25
Atxn1P54254 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atxn1P54254 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atxn1P54254 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atxn1P54254 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atxn1P54254 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atxn1P54254 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atxn1P54254 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Atxn1P54254 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Atxn1P54254 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Atxn1P54254 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Atxn1P54254 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.49□□□□□ -0.25
Atxn1P54254 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Atxn1P54254 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atxn1P54254 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atxn1P54254 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atxn1P54254 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Atxn1P54254 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atxn1P54254 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atxn1P54254 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.49□□□□□ -0.25
Atxn1P54254 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Atxn1P54254 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atxn1P54254 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atxn1P54254 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atxn1P54254 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Atxn1P54254 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atxn1P54254 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms