Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fdft1P53798 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fdft1P53798 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Fdft1P53798 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Fdft1P53798 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Fdft1P53798 Gm21470-201ENSMUST00000187680 696 ntBASIC13.63□□□□□ -0.23
Fdft1P53798 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fdft1P53798 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fdft1P53798 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fdft1P53798 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fdft1P53798 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.63□□□□□ -0.23
Fdft1P53798 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fdft1P53798 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Fdft1P53798 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.63□□□□□ -0.23
Fdft1P53798 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fdft1P53798 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fdft1P53798 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fdft1P53798 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Fdft1P53798 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Fdft1P53798 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Fdft1P53798 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Fdft1P53798 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Fdft1P53798 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Fdft1P53798 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Fdft1P53798 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fdft1P53798 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fdft1P53798 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fdft1P53798 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fdft1P53798 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fdft1P53798 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Fdft1P53798 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fdft1P53798 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fdft1P53798 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fdft1P53798 Gm14767-201ENSMUST00000121559 586 ntBASIC13.62□□□□□ -0.23
Fdft1P53798 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fdft1P53798 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.62□□□□□ -0.23
Fdft1P53798 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.62□□□□□ -0.23
Fdft1P53798 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.62□□□□□ -0.23
Fdft1P53798 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Fdft1P53798 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fdft1P53798 Gm5867-201ENSMUST00000063197 592 ntBASIC13.62□□□□□ -0.23
Fdft1P53798 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fdft1P53798 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fdft1P53798 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Fdft1P53798 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.62□□□□□ -0.23
Fdft1P53798 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Fdft1P53798 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Fdft1P53798 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fdft1P53798 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fdft1P53798 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Fdft1P53798 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Fdft1P53798 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fdft1P53798 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Fdft1P53798 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Fdft1P53798 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Fdft1P53798 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Fdft1P53798 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.62□□□□□ -0.23
Fdft1P53798 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Fdft1P53798 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fdft1P53798 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fdft1P53798 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Fdft1P53798 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fdft1P53798 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.61□□□□□ -0.23
Fdft1P53798 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fdft1P53798 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Fdft1P53798 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fdft1P53798 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Fdft1P53798 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fdft1P53798 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Fdft1P53798 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Fdft1P53798 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Fdft1P53798 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fdft1P53798 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fdft1P53798 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fdft1P53798 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Fdft1P53798 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Fdft1P53798 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.61□□□□□ -0.23
Fdft1P53798 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Fdft1P53798 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Fdft1P53798 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.61□□□□□ -0.23
Fdft1P53798 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.61□□□□□ -0.23
Fdft1P53798 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Fdft1P53798 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Fdft1P53798 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fdft1P53798 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fdft1P53798 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fdft1P53798 Mir497b-201ENSMUST00000093601 125 ntBASIC13.61□□□□□ -0.23
Fdft1P53798 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Fdft1P53798 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fdft1P53798 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fdft1P53798 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fdft1P53798 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fdft1P53798 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Fdft1P53798 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Fdft1P53798 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Fdft1P53798 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Fdft1P53798 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fdft1P53798 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Fdft1P53798 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fdft1P53798 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms