Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.47□□□□□ -0.25
Pdx1P52946 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Pdx1P52946 Gm5354-201ENSMUST00000182417 973 ntBASIC13.47□□□□□ -0.25
Pdx1P52946 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.47□□□□□ -0.25
Pdx1P52946 Gm19078-201ENSMUST00000206311 727 ntBASIC13.47□□□□□ -0.25
Pdx1P52946 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.47□□□□□ -0.25
Pdx1P52946 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pdx1P52946 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.47□□□□□ -0.25
Pdx1P52946 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdx1P52946 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdx1P52946 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdx1P52946 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdx1P52946 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Pdx1P52946 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdx1P52946 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdx1P52946 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.47□□□□□ -0.25
Pdx1P52946 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pdx1P52946 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Pdx1P52946 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdx1P52946 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdx1P52946 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdx1P52946 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pdx1P52946 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pdx1P52946 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdx1P52946 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pdx1P52946 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Pdx1P52946 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.46□□□□□ -0.25
Pdx1P52946 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Pdx1P52946 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.46□□□□□ -0.25
Pdx1P52946 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
Pdx1P52946 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.46□□□□□ -0.25
Pdx1P52946 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pdx1P52946 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pdx1P52946 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pdx1P52946 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pdx1P52946 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.46□□□□□ -0.25
Pdx1P52946 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pdx1P52946 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Pdx1P52946 Gm28631-201ENSMUST00000190740 334 ntBASIC13.46□□□□□ -0.25
Pdx1P52946 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.46□□□□□ -0.25
Pdx1P52946 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Pdx1P52946 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Pdx1P52946 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pdx1P52946 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.46□□□□□ -0.25
Pdx1P52946 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pdx1P52946 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Pdx1P52946 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Pdx1P52946 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Pdx1P52946 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pdx1P52946 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pdx1P52946 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pdx1P52946 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Pdx1P52946 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.46□□□□□ -0.26
Pdx1P52946 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Pdx1P52946 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pdx1P52946 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pdx1P52946 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.45□□□□□ -0.26
Pdx1P52946 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pdx1P52946 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Pdx1P52946 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdx1P52946 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdx1P52946 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdx1P52946 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdx1P52946 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdx1P52946 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdx1P52946 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdx1P52946 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdx1P52946 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdx1P52946 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.45□□□□□ -0.26
Pdx1P52946 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Pdx1P52946 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pdx1P52946 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pdx1P52946 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdx1P52946 Gm11524-201ENSMUST00000119349 807 ntBASIC13.45□□□□□ -0.26
Pdx1P52946 Gm12485-201ENSMUST00000119641 291 ntBASIC13.45□□□□□ -0.26
Pdx1P52946 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pdx1P52946 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Pdx1P52946 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Pdx1P52946 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Pdx1P52946 Gm26464-201ENSMUST00000157094 305 ntBASIC13.45□□□□□ -0.26
Pdx1P52946 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdx1P52946 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.45□□□□□ -0.26
Pdx1P52946 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.45□□□□□ -0.26
Pdx1P52946 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdx1P52946 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.45□□□□□ -0.26
Pdx1P52946 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdx1P52946 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdx1P52946 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdx1P52946 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Pdx1P52946 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdx1P52946 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdx1P52946 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdx1P52946 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.45□□□□□ -0.26
Pdx1P52946 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Pdx1P52946 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdx1P52946 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pdx1P52946 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdx1P52946 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Pdx1P52946 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdx1P52946 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms