Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
GdnfP48540 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
GdnfP48540 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC11.95□□□□□ -0.5
GdnfP48540 AC131710.1-201ENSMUST00000228336 990 ntBASIC11.95□□□□□ -0.5
GdnfP48540 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
GdnfP48540 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
GdnfP48540 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.95□□□□□ -0.5
GdnfP48540 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
GdnfP48540 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
GdnfP48540 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
GdnfP48540 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
GdnfP48540 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
GdnfP48540 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
GdnfP48540 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
GdnfP48540 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
GdnfP48540 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.95□□□□□ -0.5
GdnfP48540 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
GdnfP48540 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
GdnfP48540 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
GdnfP48540 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.94□□□□□ -0.5
GdnfP48540 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
GdnfP48540 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
GdnfP48540 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
GdnfP48540 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
GdnfP48540 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
GdnfP48540 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
GdnfP48540 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
GdnfP48540 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
GdnfP48540 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
GdnfP48540 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
GdnfP48540 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
GdnfP48540 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
GdnfP48540 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.94□□□□□ -0.5
GdnfP48540 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
GdnfP48540 Gm26308-201ENSMUST00000157768 69 ntBASIC11.94□□□□□ -0.5
GdnfP48540 Gm8116-201ENSMUST00000182917 1201 ntBASIC11.94□□□□□ -0.5
GdnfP48540 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
GdnfP48540 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.94□□□□□ -0.5
GdnfP48540 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
GdnfP48540 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
GdnfP48540 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
GdnfP48540 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
GdnfP48540 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
GdnfP48540 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
GdnfP48540 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC11.94□□□□□ -0.5
GdnfP48540 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
GdnfP48540 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
GdnfP48540 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
GdnfP48540 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
GdnfP48540 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
GdnfP48540 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
GdnfP48540 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
GdnfP48540 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
GdnfP48540 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.94□□□□□ -0.5
GdnfP48540 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
GdnfP48540 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
GdnfP48540 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
GdnfP48540 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
GdnfP48540 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
GdnfP48540 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
GdnfP48540 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
GdnfP48540 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
GdnfP48540 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
GdnfP48540 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
GdnfP48540 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
GdnfP48540 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
GdnfP48540 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
GdnfP48540 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC11.93□□□□□ -0.5
GdnfP48540 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
GdnfP48540 Gm42466-201ENSMUST00000202099 1301 ntBASIC11.93□□□□□ -0.5
GdnfP48540 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
GdnfP48540 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
GdnfP48540 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
GdnfP48540 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.93□□□□□ -0.5
GdnfP48540 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
GdnfP48540 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.93□□□□□ -0.5
GdnfP48540 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
GdnfP48540 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC11.93□□□□□ -0.5
GdnfP48540 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC11.93□□□□□ -0.5
GdnfP48540 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.93□□□□□ -0.5
GdnfP48540 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
GdnfP48540 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
GdnfP48540 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
GdnfP48540 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
GdnfP48540 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
GdnfP48540 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.93□□□□□ -0.5
GdnfP48540 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
GdnfP48540 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
GdnfP48540 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
GdnfP48540 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
GdnfP48540 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
GdnfP48540 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
GdnfP48540 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
GdnfP48540 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
GdnfP48540 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
GdnfP48540 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
GdnfP48540 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
GdnfP48540 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
GdnfP48540 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
GdnfP48540 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms