Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfx2P48379 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Rfx2P48379 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfx2P48379 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfx2P48379 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.28□□□□□ -0.12
Rfx2P48379 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfx2P48379 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfx2P48379 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfx2P48379 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfx2P48379 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rfx2P48379 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rfx2P48379 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Rfx2P48379 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rfx2P48379 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rfx2P48379 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rfx2P48379 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rfx2P48379 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rfx2P48379 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
Rfx2P48379 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rfx2P48379 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rfx2P48379 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.27□□□□□ -0.13
Rfx2P48379 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfx2P48379 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.27□□□□□ -0.13
Rfx2P48379 Gm27772-201ENSMUST00000184900 187 ntBASIC14.27□□□□□ -0.13
Rfx2P48379 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.27□□□□□ -0.13
Rfx2P48379 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rfx2P48379 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.27□□□□□ -0.13
Rfx2P48379 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfx2P48379 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfx2P48379 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfx2P48379 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Rfx2P48379 Gm25857-201ENSMUST00000082788 129 ntBASIC14.27□□□□□ -0.13
Rfx2P48379 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Rfx2P48379 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfx2P48379 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.27□□□□□ -0.13
Rfx2P48379 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfx2P48379 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfx2P48379 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rfx2P48379 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Rfx2P48379 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Rfx2P48379 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfx2P48379 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfx2P48379 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Rfx2P48379 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfx2P48379 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rfx2P48379 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rfx2P48379 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx2P48379 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx2P48379 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rfx2P48379 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx2P48379 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx2P48379 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx2P48379 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Rfx2P48379 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx2P48379 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx2P48379 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx2P48379 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.26□□□□□ -0.13
Rfx2P48379 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx2P48379 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx2P48379 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
Rfx2P48379 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.26□□□□□ -0.13
Rfx2P48379 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rfx2P48379 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.26□□□□□ -0.13
Rfx2P48379 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.26□□□□□ -0.13
Rfx2P48379 Gm8927-201ENSMUST00000181978 981 ntBASIC14.26□□□□□ -0.13
Rfx2P48379 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx2P48379 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.26□□□□□ -0.13
Rfx2P48379 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx2P48379 Gm3222-201ENSMUST00000071282 990 ntBASIC14.26□□□□□ -0.13
Rfx2P48379 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rfx2P48379 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx2P48379 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.26□□□□□ -0.13
Rfx2P48379 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rfx2P48379 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rfx2P48379 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx2P48379 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.26□□□□□ -0.13
Rfx2P48379 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx2P48379 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx2P48379 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx2P48379 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx2P48379 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx2P48379 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx2P48379 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfx2P48379 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx2P48379 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx2P48379 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.25□□□□□ -0.13
Rfx2P48379 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx2P48379 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx2P48379 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.25□□□□□ -0.13
Rfx2P48379 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx2P48379 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx2P48379 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Rfx2P48379 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx2P48379 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx2P48379 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx2P48379 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx2P48379 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx2P48379 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx2P48379 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx2P48379 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms