Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox18P43680 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Sox18P43680 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox18P43680 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Sox18P43680 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox18P43680 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox18P43680 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Sox18P43680 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox18P43680 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Sox18P43680 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC13.09□□□□□ -0.31
Sox18P43680 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox18P43680 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox18P43680 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox18P43680 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox18P43680 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Sox18P43680 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox18P43680 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox18P43680 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox18P43680 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox18P43680 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox18P43680 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox18P43680 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox18P43680 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox18P43680 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Sox18P43680 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox18P43680 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox18P43680 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox18P43680 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox18P43680 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox18P43680 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox18P43680 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox18P43680 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox18P43680 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox18P43680 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.09□□□□□ -0.31
Sox18P43680 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox18P43680 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox18P43680 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Sox18P43680 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox18P43680 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Sox18P43680 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.08□□□□□ -0.31
Sox18P43680 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sox18P43680 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.31
Sox18P43680 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.08□□□□□ -0.32
Sox18P43680 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sox18P43680 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Sox18P43680 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox18P43680 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox18P43680 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sox18P43680 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox18P43680 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.08□□□□□ -0.32
Sox18P43680 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sox18P43680 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Sox18P43680 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC13.08□□□□□ -0.32
Sox18P43680 Gm37641-201ENSMUST00000193837 239 ntBASIC13.08□□□□□ -0.32
Sox18P43680 Rps4l-202ENSMUST00000204242 789 ntBASIC13.08□□□□□ -0.32
Sox18P43680 Gm44608-201ENSMUST00000206827 855 ntBASIC13.08□□□□□ -0.32
Sox18P43680 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.08□□□□□ -0.32
Sox18P43680 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox18P43680 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox18P43680 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sox18P43680 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.08□□□□□ -0.32
Sox18P43680 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.08□□□□□ -0.32
Sox18P43680 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Sox18P43680 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox18P43680 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox18P43680 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox18P43680 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox18P43680 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox18P43680 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox18P43680 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Sox18P43680 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox18P43680 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox18P43680 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sox18P43680 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox18P43680 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox18P43680 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox18P43680 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox18P43680 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Sox18P43680 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.07□□□□□ -0.32
Sox18P43680 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sox18P43680 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox18P43680 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox18P43680 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox18P43680 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox18P43680 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sox18P43680 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.07□□□□□ -0.32
Sox18P43680 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.07□□□□□ -0.32
Sox18P43680 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox18P43680 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox18P43680 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sox18P43680 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Sox18P43680 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sox18P43680 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Sox18P43680 Gm14381-201ENSMUST00000122105 414 ntBASIC13.07□□□□□ -0.32
Sox18P43680 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC13.07□□□□□ -0.32
Sox18P43680 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.07□□□□□ -0.32
Sox18P43680 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.07□□□□□ -0.32
Sox18P43680 Gm36982-201ENSMUST00000193796 1128 ntBASIC13.07□□□□□ -0.32
Sox18P43680 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Sox18P43680 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms