Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hist1h1dP43277 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hist1h1dP43277 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC11.53□□□□□ -0.56
Hist1h1dP43277 Gm14494-201ENSMUST00000118786 435 ntBASIC11.53□□□□□ -0.56
Hist1h1dP43277 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC11.53□□□□□ -0.56
Hist1h1dP43277 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Hist1h1dP43277 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC11.53□□□□□ -0.56
Hist1h1dP43277 Gm27494-201ENSMUST00000184735 189 ntBASIC11.53□□□□□ -0.56
Hist1h1dP43277 Gm18766-201ENSMUST00000189811 808 ntBASIC11.53□□□□□ -0.56
Hist1h1dP43277 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.53□□□□□ -0.56
Hist1h1dP43277 Gm6916-202ENSMUST00000205523 195 ntBASIC11.53□□□□□ -0.56
Hist1h1dP43277 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC11.53□□□□□ -0.56
Hist1h1dP43277 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC11.53□□□□□ -0.56
Hist1h1dP43277 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.53□□□□□ -0.56
Hist1h1dP43277 AC121804.3-201ENSMUST00000223420 295 ntBASIC11.53□□□□□ -0.56
Hist1h1dP43277 Dupd1-202ENSMUST00000224735 548 ntBASIC11.53□□□□□ -0.56
Hist1h1dP43277 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hist1h1dP43277 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hist1h1dP43277 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hist1h1dP43277 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Hist1h1dP43277 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hist1h1dP43277 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Hist1h1dP43277 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hist1h1dP43277 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hist1h1dP43277 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hist1h1dP43277 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hist1h1dP43277 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.53□□□□□ -0.56
Hist1h1dP43277 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hist1h1dP43277 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hist1h1dP43277 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.53□□□□□ -0.56
Hist1h1dP43277 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hist1h1dP43277 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hist1h1dP43277 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Hist1h1dP43277 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hist1h1dP43277 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Hist1h1dP43277 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hist1h1dP43277 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hist1h1dP43277 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hist1h1dP43277 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Hist1h1dP43277 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hist1h1dP43277 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Hist1h1dP43277 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Hist1h1dP43277 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hist1h1dP43277 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hist1h1dP43277 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.52□□□□□ -0.57
Hist1h1dP43277 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hist1h1dP43277 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Hist1h1dP43277 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hist1h1dP43277 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hist1h1dP43277 Gm15467-201ENSMUST00000120582 445 ntBASIC11.52□□□□□ -0.57
Hist1h1dP43277 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hist1h1dP43277 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC11.52□□□□□ -0.57
Hist1h1dP43277 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC11.52□□□□□ -0.57
Hist1h1dP43277 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.52□□□□□ -0.57
Hist1h1dP43277 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hist1h1dP43277 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hist1h1dP43277 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hist1h1dP43277 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hist1h1dP43277 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hist1h1dP43277 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.52□□□□□ -0.57
Hist1h1dP43277 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hist1h1dP43277 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hist1h1dP43277 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hist1h1dP43277 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hist1h1dP43277 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hist1h1dP43277 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Hist1h1dP43277 Gm13332-201ENSMUST00000120451 1398 ntBASIC11.52□□□□□ -0.57
Hist1h1dP43277 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hist1h1dP43277 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hist1h1dP43277 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Hist1h1dP43277 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hist1h1dP43277 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hist1h1dP43277 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hist1h1dP43277 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hist1h1dP43277 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Hist1h1dP43277 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Hist1h1dP43277 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Hist1h1dP43277 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hist1h1dP43277 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hist1h1dP43277 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.51□□□□□ -0.57
Hist1h1dP43277 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hist1h1dP43277 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hist1h1dP43277 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.51□□□□□ -0.57
Hist1h1dP43277 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hist1h1dP43277 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hist1h1dP43277 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Hist1h1dP43277 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hist1h1dP43277 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hist1h1dP43277 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.51□□□□□ -0.57
Hist1h1dP43277 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hist1h1dP43277 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hist1h1dP43277 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.51□□□□□ -0.57
Hist1h1dP43277 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Hist1h1dP43277 Gm4913-201ENSMUST00000117075 1290 ntBASIC11.51□□□□□ -0.57
Hist1h1dP43277 Mir1895-201ENSMUST00000122615 79 ntBASIC11.51□□□□□ -0.57
Hist1h1dP43277 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.51□□□□□ -0.57
Hist1h1dP43277 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC11.51□□□□□ -0.57
Hist1h1dP43277 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC11.51□□□□□ -0.57
Hist1h1dP43277 Gm16476-201ENSMUST00000221544 139 ntBASIC11.51□□□□□ -0.57
Hist1h1dP43277 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms