Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Msh2P43247 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msh2P43247 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Msh2P43247 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Msh2P43247 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Msh2P43247 AA543401-201ENSMUST00000164248 1269 ntBASIC14.05□□□□□ -0.16
Msh2P43247 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msh2P43247 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.05□□□□□ -0.16
Msh2P43247 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msh2P43247 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.05□□□□□ -0.16
Msh2P43247 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.05□□□□□ -0.16
Msh2P43247 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Msh2P43247 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msh2P43247 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msh2P43247 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msh2P43247 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msh2P43247 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msh2P43247 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msh2P43247 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msh2P43247 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.05□□□□□ -0.16
Msh2P43247 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msh2P43247 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.05□□□□□ -0.16
Msh2P43247 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msh2P43247 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Msh2P43247 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msh2P43247 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Msh2P43247 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msh2P43247 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msh2P43247 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msh2P43247 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Msh2P43247 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Msh2P43247 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msh2P43247 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Msh2P43247 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msh2P43247 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Msh2P43247 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msh2P43247 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Msh2P43247 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Msh2P43247 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msh2P43247 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msh2P43247 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msh2P43247 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.04□□□□□ -0.16
Msh2P43247 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Msh2P43247 Gm12882-201ENSMUST00000121696 517 ntBASIC14.04□□□□□ -0.16
Msh2P43247 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Msh2P43247 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msh2P43247 Gm27533-201ENSMUST00000183800 152 ntBASIC14.04□□□□□ -0.16
Msh2P43247 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.04□□□□□ -0.16
Msh2P43247 AA619741-201ENSMUST00000195095 646 ntBASIC14.04□□□□□ -0.16
Msh2P43247 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Msh2P43247 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Msh2P43247 Dupd1-202ENSMUST00000224735 548 ntBASIC14.04□□□□□ -0.16
Msh2P43247 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.04□□□□□ -0.16
Msh2P43247 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msh2P43247 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msh2P43247 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msh2P43247 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Msh2P43247 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.04□□□□□ -0.16
Msh2P43247 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msh2P43247 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Msh2P43247 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msh2P43247 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msh2P43247 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msh2P43247 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msh2P43247 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Msh2P43247 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Msh2P43247 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Msh2P43247 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Msh2P43247 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Msh2P43247 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Msh2P43247 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Msh2P43247 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.03□□□□□ -0.16
Msh2P43247 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Msh2P43247 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Msh2P43247 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Msh2P43247 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Msh2P43247 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Msh2P43247 Gm17837-201ENSMUST00000186435 985 ntBASIC14.03□□□□□ -0.16
Msh2P43247 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.03□□□□□ -0.16
Msh2P43247 Gm6888-201ENSMUST00000221983 706 ntBASIC14.03□□□□□ -0.16
Msh2P43247 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.03□□□□□ -0.16
Msh2P43247 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Msh2P43247 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Msh2P43247 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Msh2P43247 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Msh2P43247 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Msh2P43247 BC001981-202ENSMUST00000191393 1545 ntBASIC14.03□□□□□ -0.16
Msh2P43247 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.03□□□□□ -0.16
Msh2P43247 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Msh2P43247 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Msh2P43247 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Msh2P43247 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Msh2P43247 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Msh2P43247 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Msh2P43247 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Msh2P43247 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Msh2P43247 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Msh2P43247 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Msh2P43247 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Msh2P43247 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms