Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.13□□□□□ -0.15
HttP42859 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HttP42859 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HttP42859 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HttP42859 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
HttP42859 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HttP42859 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HttP42859 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
HttP42859 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HttP42859 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
HttP42859 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
HttP42859 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HttP42859 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
HttP42859 Mir680-2-201ENSMUST00000102163 110 ntBASIC14.12□□□□□ -0.15
HttP42859 Gm23251-201ENSMUST00000103773 110 ntBASIC14.12□□□□□ -0.15
HttP42859 Gm11801-201ENSMUST00000117807 746 ntBASIC14.12□□□□□ -0.15
HttP42859 Gm13888-201ENSMUST00000119148 422 ntBASIC14.12□□□□□ -0.15
HttP42859 Gm12502-201ENSMUST00000120197 444 ntBASIC14.12□□□□□ -0.15
HttP42859 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC14.12□□□□□ -0.15
HttP42859 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HttP42859 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.12□□□□□ -0.15
HttP42859 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
HttP42859 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HttP42859 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HttP42859 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HttP42859 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HttP42859 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
HttP42859 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
HttP42859 Gm6039-201ENSMUST00000121667 1250 ntBASIC14.12□□□□□ -0.15
HttP42859 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC14.12□□□□□ -0.15
HttP42859 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HttP42859 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.12□□□□□ -0.15
HttP42859 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HttP42859 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
HttP42859 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HttP42859 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HttP42859 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC14.12□□□□□ -0.15
HttP42859 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HttP42859 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
HttP42859 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
HttP42859 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HttP42859 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC14.11□□□□□ -0.15
HttP42859 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC14.11□□□□□ -0.15
HttP42859 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
HttP42859 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HttP42859 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HttP42859 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HttP42859 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HttP42859 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HttP42859 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HttP42859 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HttP42859 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HttP42859 Gm14832-201ENSMUST00000121289 322 ntBASIC14.11□□□□□ -0.15
HttP42859 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HttP42859 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC14.11□□□□□ -0.15
HttP42859 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC14.11□□□□□ -0.15
HttP42859 Gm45550-201ENSMUST00000209380 946 ntBASIC14.11□□□□□ -0.15
HttP42859 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
HttP42859 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.11□□□□□ -0.15
HttP42859 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HttP42859 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HttP42859 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HttP42859 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
HttP42859 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC14.1□□□□□ -0.15
HttP42859 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14.1□□□□□ -0.15
HttP42859 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HttP42859 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HttP42859 CT009713.8-201ENSMUST00000225448 560 ntBASIC14.1□□□□□ -0.15
HttP42859 Mir219a-1-201ENSMUST00000083621 110 ntBASIC14.1□□□□□ -0.15
HttP42859 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HttP42859 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
HttP42859 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HttP42859 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
HttP42859 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HttP42859 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC14.1□□□□□ -0.15
HttP42859 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HttP42859 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC14.1□□□□□ -0.15
HttP42859 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC14.1□□□□□ -0.15
HttP42859 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.1□□□□□ -0.15
HttP42859 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HttP42859 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HttP42859 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HttP42859 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
HttP42859 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.1□□□□□ -0.15
HttP42859 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HttP42859 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HttP42859 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HttP42859 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HttP42859 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
HttP42859 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HttP42859 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HttP42859 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC14.1□□□□□ -0.15
HttP42859 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
HttP42859 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC14.1□□□□□ -0.15
HttP42859 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
HttP42859 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HttP42859 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.09□□□□□ -0.15
HttP42859 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HttP42859 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HttP42859 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms