Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Mmp9P41245 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Mmp9P41245 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Mmp9P41245 Gm13233-201ENSMUST00000118760 1443 ntBASIC11.44□□□□□ -0.58
Mmp9P41245 Gm13244-201ENSMUST00000118855 1446 ntBASIC11.44□□□□□ -0.58
Mmp9P41245 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Mmp9P41245 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.44□□□□□ -0.58
Mmp9P41245 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Mmp9P41245 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Mmp9P41245 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Mmp9P41245 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Mmp9P41245 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.44□□□□□ -0.58
Mmp9P41245 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.44□□□□□ -0.58
Mmp9P41245 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Mmp9P41245 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Mmp9P41245 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC11.44□□□□□ -0.58
Mmp9P41245 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC11.44□□□□□ -0.58
Mmp9P41245 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC11.44□□□□□ -0.58
Mmp9P41245 Gm15500-202ENSMUST00000071641 1019 ntBASIC11.44□□□□□ -0.58
Mmp9P41245 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Mmp9P41245 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Mmp9P41245 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Mmp9P41245 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Mmp9P41245 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Mmp9P41245 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Mmp9P41245 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
Mmp9P41245 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Mmp9P41245 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Mmp9P41245 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Mmp9P41245 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Mmp9P41245 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Mmp9P41245 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Mmp9P41245 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Mmp9P41245 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Mmp9P41245 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp9P41245 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp9P41245 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Mmp9P41245 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp9P41245 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp9P41245 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp9P41245 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp9P41245 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp9P41245 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp9P41245 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp9P41245 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp9P41245 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp9P41245 Gm5479-201ENSMUST00000160578 435 ntBASIC11.43□□□□□ -0.58
Mmp9P41245 Mir6956-201ENSMUST00000183598 62 ntBASIC11.43□□□□□ -0.58
Mmp9P41245 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC11.43□□□□□ -0.58
Mmp9P41245 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp9P41245 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC11.43□□□□□ -0.58
Mmp9P41245 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp9P41245 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp9P41245 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Mmp9P41245 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp9P41245 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp9P41245 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.43□□□□□ -0.58
Mmp9P41245 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp9P41245 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp9P41245 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp9P41245 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp9P41245 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.43□□□□□ -0.58
Mmp9P41245 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp9P41245 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp9P41245 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp9P41245 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Mmp9P41245 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp9P41245 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp9P41245 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp9P41245 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp9P41245 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp9P41245 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp9P41245 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp9P41245 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp9P41245 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Mmp9P41245 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.42□□□□□ -0.58
Mmp9P41245 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp9P41245 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.42□□□□□ -0.58
Mmp9P41245 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp9P41245 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Mmp9P41245 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp9P41245 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp9P41245 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Mmp9P41245 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp9P41245 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp9P41245 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp9P41245 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp9P41245 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp9P41245 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp9P41245 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp9P41245 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp9P41245 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp9P41245 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp9P41245 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Mmp9P41245 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp9P41245 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp9P41245 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp9P41245 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC11.42□□□□□ -0.58
Mmp9P41245 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Mmp9P41245 Gm27321-201ENSMUST00000185021 205 ntBASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms