Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Abca1P41233 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Abca1P41233 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Abca1P41233 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Abca1P41233 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Abca1P41233 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.33□□□□□ -0.6
Abca1P41233 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Abca1P41233 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Abca1P41233 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Abca1P41233 Gm15240-201ENSMUST00000118156 720 ntBASIC11.33□□□□□ -0.6
Abca1P41233 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Abca1P41233 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Abca1P41233 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Abca1P41233 Mir3102-201ENSMUST00000175555 104 ntBASIC11.33□□□□□ -0.6
Abca1P41233 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.33□□□□□ -0.6
Abca1P41233 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Abca1P41233 Gm4804-201ENSMUST00000182234 999 ntBASIC11.33□□□□□ -0.6
Abca1P41233 Gm27514-201ENSMUST00000183692 110 ntBASIC11.33□□□□□ -0.6
Abca1P41233 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.33□□□□□ -0.6
Abca1P41233 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Abca1P41233 Gm7561-201ENSMUST00000211203 886 ntBASIC11.33□□□□□ -0.6
Abca1P41233 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.33□□□□□ -0.6
Abca1P41233 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.33□□□□□ -0.6
Abca1P41233 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Abca1P41233 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Abca1P41233 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Abca1P41233 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Abca1P41233 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Abca1P41233 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Abca1P41233 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Abca1P41233 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Abca1P41233 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.33□□□□□ -0.6
Abca1P41233 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Abca1P41233 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.33□□□□□ -0.6
Abca1P41233 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Abca1P41233 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Abca1P41233 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.33□□□□□ -0.6
Abca1P41233 Gm12928-201ENSMUST00000117115 573 ntBASIC11.33□□□□□ -0.6
Abca1P41233 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.33□□□□□ -0.6
Abca1P41233 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.33□□□□□ -0.6
Abca1P41233 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Abca1P41233 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.33□□□□□ -0.6
Abca1P41233 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Abca1P41233 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Abca1P41233 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Abca1P41233 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Abca1P41233 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Abca1P41233 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Abca1P41233 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Abca1P41233 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Abca1P41233 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Abca1P41233 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Abca1P41233 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Abca1P41233 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Abca1P41233 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Abca1P41233 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Abca1P41233 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Abca1P41233 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Abca1P41233 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Abca1P41233 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.32□□□□□ -0.6
Abca1P41233 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Abca1P41233 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Abca1P41233 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Abca1P41233 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Abca1P41233 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Abca1P41233 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Abca1P41233 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Abca1P41233 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Abca1P41233 Gm11814-201ENSMUST00000119515 929 ntBASIC11.32□□□□□ -0.6
Abca1P41233 Gm15376-201ENSMUST00000122258 783 ntBASIC11.32□□□□□ -0.6
Abca1P41233 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.32□□□□□ -0.6
Abca1P41233 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.32□□□□□ -0.6
Abca1P41233 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.32□□□□□ -0.6
Abca1P41233 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Abca1P41233 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.32□□□□□ -0.6
Abca1P41233 Gm30437-201ENSMUST00000206086 1201 ntBASIC11.32□□□□□ -0.6
Abca1P41233 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.32□□□□□ -0.6
Abca1P41233 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Abca1P41233 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Abca1P41233 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Abca1P41233 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Abca1P41233 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.32□□□□□ -0.6
Abca1P41233 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Abca1P41233 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Abca1P41233 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Abca1P41233 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Abca1P41233 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Abca1P41233 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Abca1P41233 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Abca1P41233 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Abca1P41233 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Abca1P41233 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Abca1P41233 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Abca1P41233 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Abca1P41233 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Abca1P41233 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Abca1P41233 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Abca1P41233 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Abca1P41233 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Abca1P41233 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms