Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox6P40645 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox6P40645 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox6P40645 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sox6P40645 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox6P40645 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Sox6P40645 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox6P40645 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox6P40645 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox6P40645 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox6P40645 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox6P40645 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox6P40645 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox6P40645 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Sox6P40645 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox6P40645 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Sox6P40645 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox6P40645 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sox6P40645 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox6P40645 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sox6P40645 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox6P40645 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sox6P40645 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.8□□□□□ -0.36
Sox6P40645 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox6P40645 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Sox6P40645 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Sox6P40645 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.8□□□□□ -0.36
Sox6P40645 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox6P40645 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox6P40645 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox6P40645 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox6P40645 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sox6P40645 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Sox6P40645 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.8□□□□□ -0.36
Sox6P40645 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.8□□□□□ -0.36
Sox6P40645 Gm15693-201ENSMUST00000120470 637 ntBASIC12.8□□□□□ -0.36
Sox6P40645 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.8□□□□□ -0.36
Sox6P40645 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Sox6P40645 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Sox6P40645 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox6P40645 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sox6P40645 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox6P40645 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox6P40645 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Sox6P40645 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox6P40645 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.8□□□□□ -0.36
Sox6P40645 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sox6P40645 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.8□□□□□ -0.36
Sox6P40645 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox6P40645 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox6P40645 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox6P40645 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Sox6P40645 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox6P40645 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Sox6P40645 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox6P40645 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.79□□□□□ -0.36
Sox6P40645 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Sox6P40645 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox6P40645 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox6P40645 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox6P40645 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Sox6P40645 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox6P40645 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox6P40645 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox6P40645 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox6P40645 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox6P40645 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox6P40645 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox6P40645 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox6P40645 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox6P40645 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox6P40645 Gm5566-201ENSMUST00000116118 459 ntBASIC12.79□□□□□ -0.36
Sox6P40645 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Sox6P40645 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.79□□□□□ -0.36
Sox6P40645 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox6P40645 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.79□□□□□ -0.36
Sox6P40645 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.79□□□□□ -0.36
Sox6P40645 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox6P40645 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Sox6P40645 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox6P40645 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.79□□□□□ -0.36
Sox6P40645 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox6P40645 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox6P40645 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox6P40645 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox6P40645 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox6P40645 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox6P40645 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox6P40645 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.79□□□□□ -0.36
Sox6P40645 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox6P40645 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox6P40645 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox6P40645 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Sox6P40645 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox6P40645 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox6P40645 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.79□□□□□ -0.36
Sox6P40645 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox6P40645 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox6P40645 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox6P40645 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms