Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Chd1P40201 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC19.99■□□□□ 0.79
Chd1P40201 Gm27627-201ENSMUST00000183644 150 ntBASIC19.99■□□□□ 0.79
Chd1P40201 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC19.99■□□□□ 0.79
Chd1P40201 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC19.99■□□□□ 0.79
Chd1P40201 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC19.99■□□□□ 0.79
Chd1P40201 AC166344.1-202ENSMUST00000224139 234 ntBASIC19.99■□□□□ 0.79
Chd1P40201 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Chd1P40201 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Chd1P40201 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chd1P40201 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chd1P40201 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chd1P40201 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chd1P40201 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chd1P40201 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chd1P40201 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chd1P40201 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chd1P40201 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC19.98■□□□□ 0.79
Chd1P40201 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC19.98■□□□□ 0.79
Chd1P40201 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC19.98■□□□□ 0.79
Chd1P40201 AC124457.1-201ENSMUST00000198845 120 ntBASIC19.98■□□□□ 0.79
Chd1P40201 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC19.98■□□□□ 0.79
Chd1P40201 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chd1P40201 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chd1P40201 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chd1P40201 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chd1P40201 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Chd1P40201 AC162938.1-201ENSMUST00000213140 2323 ntBASIC19.97■□□□□ 0.79
Chd1P40201 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chd1P40201 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Chd1P40201 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Chd1P40201 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
Chd1P40201 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chd1P40201 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Chd1P40201 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chd1P40201 AC091458.1-201ENSMUST00000220902 1361 ntBASIC19.97■□□□□ 0.79
Chd1P40201 Gm5525-201ENSMUST00000190438 1312 ntBASIC19.97■□□□□ 0.79
Chd1P40201 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC19.97■□□□□ 0.79
Chd1P40201 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Chd1P40201 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC19.97■□□□□ 0.79
Chd1P40201 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chd1P40201 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chd1P40201 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chd1P40201 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chd1P40201 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chd1P40201 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Chd1P40201 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chd1P40201 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chd1P40201 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Chd1P40201 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chd1P40201 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chd1P40201 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chd1P40201 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chd1P40201 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chd1P40201 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chd1P40201 Gm15711-201ENSMUST00000118889 535 ntBASIC19.96■□□□□ 0.79
Chd1P40201 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Chd1P40201 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Chd1P40201 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC19.96■□□□□ 0.79
Chd1P40201 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chd1P40201 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chd1P40201 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chd1P40201 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chd1P40201 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chd1P40201 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Chd1P40201 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Chd1P40201 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chd1P40201 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chd1P40201 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Chd1P40201 AY036118-201ENSMUST00000200021 923 ntBASIC19.96■□□□□ 0.79
Chd1P40201 Aprt-ps-201ENSMUST00000212311 505 ntBASIC19.96■□□□□ 0.79
Chd1P40201 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chd1P40201 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chd1P40201 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chd1P40201 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chd1P40201 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Chd1P40201 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chd1P40201 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chd1P40201 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Chd1P40201 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Chd1P40201 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Chd1P40201 Gm7851-201ENSMUST00000117574 323 ntBASIC19.95■□□□□ 0.78
Chd1P40201 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC19.95■□□□□ 0.78
Chd1P40201 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC19.95■□□□□ 0.78
Chd1P40201 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chd1P40201 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Chd1P40201 Gm21027-201ENSMUST00000219300 1236 ntBASIC19.95■□□□□ 0.78
Chd1P40201 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chd1P40201 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Chd1P40201 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC19.95■□□□□ 0.78
Chd1P40201 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chd1P40201 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chd1P40201 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chd1P40201 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Chd1P40201 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chd1P40201 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC19.94■□□□□ 0.78
Chd1P40201 Gm6652-201ENSMUST00000186414 1070 ntBASIC19.94■□□□□ 0.78
Chd1P40201 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC19.94■□□□□ 0.78
Chd1P40201 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Chd1P40201 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms