Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.6□□□□□ -0.39
Foxa1P35582 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxa1P35582 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxa1P35582 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxa1P35582 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxa1P35582 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxa1P35582 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Foxa1P35582 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxa1P35582 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Foxa1P35582 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.6□□□□□ -0.39
Foxa1P35582 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Foxa1P35582 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Foxa1P35582 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxa1P35582 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxa1P35582 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxa1P35582 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxa1P35582 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxa1P35582 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Foxa1P35582 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Foxa1P35582 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxa1P35582 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxa1P35582 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxa1P35582 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxa1P35582 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxa1P35582 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxa1P35582 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Foxa1P35582 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxa1P35582 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Foxa1P35582 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxa1P35582 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxa1P35582 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxa1P35582 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxa1P35582 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxa1P35582 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Foxa1P35582 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxa1P35582 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Foxa1P35582 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Foxa1P35582 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Foxa1P35582 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.59□□□□□ -0.39
Foxa1P35582 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.59□□□□□ -0.39
Foxa1P35582 Gm12485-201ENSMUST00000119641 291 ntBASIC12.59□□□□□ -0.39
Foxa1P35582 Gm15376-201ENSMUST00000122258 783 ntBASIC12.59□□□□□ -0.39
Foxa1P35582 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Foxa1P35582 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Foxa1P35582 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Foxa1P35582 Gm19078-201ENSMUST00000206311 727 ntBASIC12.59□□□□□ -0.39
Foxa1P35582 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.59□□□□□ -0.39
Foxa1P35582 Gm19220-201ENSMUST00000222682 803 ntBASIC12.59□□□□□ -0.39
Foxa1P35582 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxa1P35582 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Foxa1P35582 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Foxa1P35582 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Foxa1P35582 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Foxa1P35582 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxa1P35582 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxa1P35582 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxa1P35582 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Foxa1P35582 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.59□□□□□ -0.39
Foxa1P35582 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Foxa1P35582 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Foxa1P35582 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxa1P35582 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxa1P35582 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Foxa1P35582 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Foxa1P35582 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Foxa1P35582 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Foxa1P35582 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxa1P35582 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxa1P35582 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxa1P35582 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxa1P35582 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Foxa1P35582 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Foxa1P35582 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Foxa1P35582 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Foxa1P35582 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.58□□□□□ -0.39
Foxa1P35582 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Foxa1P35582 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.58□□□□□ -0.4
Foxa1P35582 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Foxa1P35582 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Foxa1P35582 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Foxa1P35582 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Foxa1P35582 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.58□□□□□ -0.4
Foxa1P35582 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Foxa1P35582 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Foxa1P35582 Gm11524-201ENSMUST00000119349 807 ntBASIC12.58□□□□□ -0.4
Foxa1P35582 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.58□□□□□ -0.4
Foxa1P35582 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Foxa1P35582 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Foxa1P35582 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Foxa1P35582 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.58□□□□□ -0.4
Foxa1P35582 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Foxa1P35582 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.58□□□□□ -0.4
Foxa1P35582 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.58□□□□□ -0.4
Foxa1P35582 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.58□□□□□ -0.4
Foxa1P35582 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Foxa1P35582 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Foxa1P35582 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Foxa1P35582 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Foxa1P35582 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Foxa1P35582 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms