Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Mmp3P28862 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Mmp3P28862 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Mmp3P28862 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Mmp3P28862 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Mmp3P28862 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.52□□□□□ -0.08
Mmp3P28862 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Mmp3P28862 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Mmp3P28862 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.52□□□□□ -0.08
Mmp3P28862 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Mmp3P28862 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Mmp3P28862 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Mmp3P28862 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.52□□□□□ -0.08
Mmp3P28862 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
Mmp3P28862 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Mmp3P28862 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.52□□□□□ -0.09
Mmp3P28862 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Mmp3P28862 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Mmp3P28862 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.52□□□□□ -0.09
Mmp3P28862 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Mmp3P28862 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.52□□□□□ -0.09
Mmp3P28862 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.52□□□□□ -0.09
Mmp3P28862 Gm27514-201ENSMUST00000183692 110 ntBASIC14.52□□□□□ -0.09
Mmp3P28862 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.52□□□□□ -0.09
Mmp3P28862 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.52□□□□□ -0.09
Mmp3P28862 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Mmp3P28862 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.52□□□□□ -0.09
Mmp3P28862 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Mmp3P28862 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Mmp3P28862 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Mmp3P28862 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Mmp3P28862 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Mmp3P28862 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.52□□□□□ -0.09
Mmp3P28862 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Mmp3P28862 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Mmp3P28862 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Mmp3P28862 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Mmp3P28862 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
Mmp3P28862 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Mmp3P28862 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.52□□□□□ -0.09
Mmp3P28862 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Mmp3P28862 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Mmp3P28862 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mmp3P28862 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mmp3P28862 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.51□□□□□ -0.09
Mmp3P28862 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.51□□□□□ -0.09
Mmp3P28862 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mmp3P28862 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Mmp3P28862 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
Mmp3P28862 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mmp3P28862 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.51□□□□□ -0.09
Mmp3P28862 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mmp3P28862 Gm14350-201ENSMUST00000116642 640 ntBASIC14.51□□□□□ -0.09
Mmp3P28862 Gm13369-201ENSMUST00000119442 987 ntBASIC14.51□□□□□ -0.09
Mmp3P28862 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Mmp3P28862 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Mmp3P28862 Gm5370-201ENSMUST00000187187 574 ntBASIC14.51□□□□□ -0.09
Mmp3P28862 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.51□□□□□ -0.09
Mmp3P28862 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Mmp3P28862 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Mmp3P28862 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mmp3P28862 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mmp3P28862 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mmp3P28862 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mmp3P28862 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mmp3P28862 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mmp3P28862 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mmp3P28862 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mmp3P28862 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.51□□□□□ -0.09
Mmp3P28862 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mmp3P28862 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Mmp3P28862 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp3P28862 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp3P28862 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp3P28862 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp3P28862 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp3P28862 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.5□□□□□ -0.09
Mmp3P28862 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp3P28862 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Mmp3P28862 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp3P28862 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp3P28862 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp3P28862 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Mmp3P28862 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp3P28862 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.5□□□□□ -0.09
Mmp3P28862 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.5□□□□□ -0.09
Mmp3P28862 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp3P28862 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.5□□□□□ -0.09
Mmp3P28862 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp3P28862 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Mmp3P28862 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.5□□□□□ -0.09
Mmp3P28862 Gm27682-201ENSMUST00000183930 110 ntBASIC14.5□□□□□ -0.09
Mmp3P28862 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.5□□□□□ -0.09
Mmp3P28862 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.5□□□□□ -0.09
Mmp3P28862 Gm45331-201ENSMUST00000209868 554 ntBASIC14.5□□□□□ -0.09
Mmp3P28862 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp3P28862 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp3P28862 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp3P28862 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mmp3P28862 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms