Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.99□□□□□ -0.17
Nfkb1P25799 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nfkb1P25799 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.99□□□□□ -0.17
Nfkb1P25799 Gm42550-201ENSMUST00000201553 960 ntBASIC13.99□□□□□ -0.17
Nfkb1P25799 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Nfkb1P25799 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.99□□□□□ -0.17
Nfkb1P25799 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Nfkb1P25799 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nfkb1P25799 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nfkb1P25799 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nfkb1P25799 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Nfkb1P25799 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nfkb1P25799 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nfkb1P25799 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nfkb1P25799 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nfkb1P25799 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nfkb1P25799 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nfkb1P25799 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nfkb1P25799 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nfkb1P25799 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nfkb1P25799 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nfkb1P25799 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Nfkb1P25799 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nfkb1P25799 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nfkb1P25799 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nfkb1P25799 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nfkb1P25799 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nfkb1P25799 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Nfkb1P25799 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nfkb1P25799 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nfkb1P25799 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nfkb1P25799 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.98□□□□□ -0.17
Nfkb1P25799 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Nfkb1P25799 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.98□□□□□ -0.17
Nfkb1P25799 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nfkb1P25799 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.98□□□□□ -0.17
Nfkb1P25799 Gm11814-201ENSMUST00000119515 929 ntBASIC13.98□□□□□ -0.17
Nfkb1P25799 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.98□□□□□ -0.17
Nfkb1P25799 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nfkb1P25799 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.98□□□□□ -0.17
Nfkb1P25799 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Nfkb1P25799 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Nfkb1P25799 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.98□□□□□ -0.17
Nfkb1P25799 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.98□□□□□ -0.17
Nfkb1P25799 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nfkb1P25799 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.98□□□□□ -0.17
Nfkb1P25799 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.98□□□□□ -0.17
Nfkb1P25799 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.98□□□□□ -0.17
Nfkb1P25799 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nfkb1P25799 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nfkb1P25799 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nfkb1P25799 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nfkb1P25799 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nfkb1P25799 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nfkb1P25799 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nfkb1P25799 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nfkb1P25799 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nfkb1P25799 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nfkb1P25799 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nfkb1P25799 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nfkb1P25799 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Nfkb1P25799 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nfkb1P25799 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nfkb1P25799 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nfkb1P25799 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Nfkb1P25799 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nfkb1P25799 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nfkb1P25799 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nfkb1P25799 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nfkb1P25799 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nfkb1P25799 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nfkb1P25799 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Nfkb1P25799 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nfkb1P25799 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nfkb1P25799 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nfkb1P25799 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Nfkb1P25799 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Nfkb1P25799 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nfkb1P25799 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nfkb1P25799 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nfkb1P25799 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nfkb1P25799 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nfkb1P25799 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Nfkb1P25799 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nfkb1P25799 Gm15770-201ENSMUST00000117498 584 ntBASIC13.97□□□□□ -0.17
Nfkb1P25799 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nfkb1P25799 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.97□□□□□ -0.17
Nfkb1P25799 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nfkb1P25799 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nfkb1P25799 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.97□□□□□ -0.17
Nfkb1P25799 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.97□□□□□ -0.17
Nfkb1P25799 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nfkb1P25799 Gm38671-201ENSMUST00000200573 130 ntBASIC13.97□□□□□ -0.17
Nfkb1P25799 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Nfkb1P25799 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.97□□□□□ -0.17
Nfkb1P25799 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.97□□□□□ -0.17
Nfkb1P25799 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Nfkb1P25799 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nfkb1P25799 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nfkb1P25799 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms