Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pde6bP23440 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pde6bP23440 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pde6bP23440 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pde6bP23440 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pde6bP23440 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.87□□□□□ -0.03
Pde6bP23440 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pde6bP23440 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.87□□□□□ -0.03
Pde6bP23440 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pde6bP23440 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pde6bP23440 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pde6bP23440 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.87□□□□□ -0.03
Pde6bP23440 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pde6bP23440 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pde6bP23440 Gm12957-201ENSMUST00000117835 377 ntBASIC14.87□□□□□ -0.03
Pde6bP23440 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pde6bP23440 Gm13689-201ENSMUST00000119360 685 ntBASIC14.87□□□□□ -0.03
Pde6bP23440 Gm8652-201ENSMUST00000181363 964 ntBASIC14.87□□□□□ -0.03
Pde6bP23440 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.87□□□□□ -0.03
Pde6bP23440 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pde6bP23440 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.87□□□□□ -0.03
Pde6bP23440 Gm6007-201ENSMUST00000208170 823 ntBASIC14.87□□□□□ -0.03
Pde6bP23440 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.87□□□□□ -0.03
Pde6bP23440 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pde6bP23440 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pde6bP23440 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pde6bP23440 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.87□□□□□ -0.03
Pde6bP23440 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Pde6bP23440 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.87□□□□□ -0.03
Pde6bP23440 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pde6bP23440 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pde6bP23440 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pde6bP23440 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pde6bP23440 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pde6bP23440 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.86□□□□□ -0.03
Pde6bP23440 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.86□□□□□ -0.03
Pde6bP23440 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pde6bP23440 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Pde6bP23440 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pde6bP23440 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pde6bP23440 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pde6bP23440 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pde6bP23440 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Pde6bP23440 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.86□□□□□ -0.03
Pde6bP23440 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.86□□□□□ -0.03
Pde6bP23440 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pde6bP23440 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pde6bP23440 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pde6bP23440 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Pde6bP23440 Gm13226-201ENSMUST00000117838 404 ntBASIC14.86□□□□□ -0.03
Pde6bP23440 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.86□□□□□ -0.03
Pde6bP23440 Gm29741-201ENSMUST00000192667 421 ntBASIC14.86□□□□□ -0.03
Pde6bP23440 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.86□□□□□ -0.03
Pde6bP23440 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pde6bP23440 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
Pde6bP23440 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pde6bP23440 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pde6bP23440 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pde6bP23440 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Pde6bP23440 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Pde6bP23440 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Pde6bP23440 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pde6bP23440 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pde6bP23440 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pde6bP23440 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.86□□□□□ -0.03
Pde6bP23440 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pde6bP23440 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pde6bP23440 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.86□□□□□ -0.03
Pde6bP23440 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pde6bP23440 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pde6bP23440 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pde6bP23440 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pde6bP23440 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Pde6bP23440 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.86□□□□□ -0.03
Pde6bP23440 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Pde6bP23440 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pde6bP23440 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pde6bP23440 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.85□□□□□ -0.03
Pde6bP23440 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.85□□□□□ -0.03
Pde6bP23440 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pde6bP23440 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pde6bP23440 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pde6bP23440 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pde6bP23440 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Pde6bP23440 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pde6bP23440 Mir698-201ENSMUST00000102164 109 ntBASIC14.85□□□□□ -0.03
Pde6bP23440 Gm12134-201ENSMUST00000122109 520 ntBASIC14.85□□□□□ -0.03
Pde6bP23440 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Pde6bP23440 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pde6bP23440 Gm45784-201ENSMUST00000188360 142 ntBASIC14.85□□□□□ -0.03
Pde6bP23440 Gm38223-201ENSMUST00000194484 695 ntBASIC14.85□□□□□ -0.03
Pde6bP23440 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pde6bP23440 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pde6bP23440 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.85□□□□□ -0.03
Pde6bP23440 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pde6bP23440 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pde6bP23440 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pde6bP23440 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pde6bP23440 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pde6bP23440 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms