Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clk1P22518 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clk1P22518 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clk1P22518 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clk1P22518 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clk1P22518 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clk1P22518 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.75□□□□□ -0.37
Clk1P22518 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Clk1P22518 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Clk1P22518 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clk1P22518 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clk1P22518 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clk1P22518 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clk1P22518 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Clk1P22518 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Clk1P22518 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Clk1P22518 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clk1P22518 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Clk1P22518 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Clk1P22518 Gm3436-201ENSMUST00000179930 840 ntBASIC12.75□□□□□ -0.37
Clk1P22518 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Clk1P22518 Gm27618-201ENSMUST00000183671 60 ntBASIC12.75□□□□□ -0.37
Clk1P22518 Gm27321-201ENSMUST00000185021 205 ntBASIC12.75□□□□□ -0.37
Clk1P22518 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clk1P22518 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clk1P22518 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.75□□□□□ -0.37
Clk1P22518 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clk1P22518 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clk1P22518 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Clk1P22518 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clk1P22518 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clk1P22518 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clk1P22518 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
Clk1P22518 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clk1P22518 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clk1P22518 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clk1P22518 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clk1P22518 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clk1P22518 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Clk1P22518 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Clk1P22518 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Clk1P22518 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clk1P22518 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clk1P22518 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clk1P22518 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Clk1P22518 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clk1P22518 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
Clk1P22518 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clk1P22518 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.74□□□□□ -0.37
Clk1P22518 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clk1P22518 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clk1P22518 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Clk1P22518 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clk1P22518 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clk1P22518 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clk1P22518 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clk1P22518 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clk1P22518 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.74□□□□□ -0.37
Clk1P22518 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.74□□□□□ -0.37
Clk1P22518 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clk1P22518 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clk1P22518 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Clk1P22518 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clk1P22518 Mir1897-201ENSMUST00000122581 272 ntBASIC12.74□□□□□ -0.37
Clk1P22518 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.74□□□□□ -0.37
Clk1P22518 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.74□□□□□ -0.37
Clk1P22518 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.74□□□□□ -0.37
Clk1P22518 Gm4804-201ENSMUST00000182234 999 ntBASIC12.74□□□□□ -0.37
Clk1P22518 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.74□□□□□ -0.37
Clk1P22518 Gm44344-201ENSMUST00000200287 129 ntBASIC12.74□□□□□ -0.37
Clk1P22518 Gm6916-202ENSMUST00000205523 195 ntBASIC12.74□□□□□ -0.37
Clk1P22518 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clk1P22518 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.74□□□□□ -0.37
Clk1P22518 Gm18027-201ENSMUST00000218947 619 ntBASIC12.74□□□□□ -0.37
Clk1P22518 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clk1P22518 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.74□□□□□ -0.37
Clk1P22518 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clk1P22518 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clk1P22518 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clk1P22518 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Clk1P22518 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clk1P22518 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Clk1P22518 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Clk1P22518 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Clk1P22518 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.74□□□□□ -0.37
Clk1P22518 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.74□□□□□ -0.37
Clk1P22518 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clk1P22518 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clk1P22518 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Clk1P22518 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clk1P22518 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clk1P22518 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clk1P22518 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.74□□□□□ -0.37
Clk1P22518 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clk1P22518 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clk1P22518 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Clk1P22518 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Clk1P22518 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clk1P22518 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Clk1P22518 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms