Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Hmgn1P18608 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hmgn1P18608 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hmgn1P18608 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn1P18608 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn1P18608 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn1P18608 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn1P18608 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn1P18608 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn1P18608 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.45□□□□□ -0.42
Hmgn1P18608 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.45□□□□□ -0.42
Hmgn1P18608 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.45□□□□□ -0.42
Hmgn1P18608 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Hmgn1P18608 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn1P18608 Mir874-201ENSMUST00000104769 76 ntBASIC12.45□□□□□ -0.42
Hmgn1P18608 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn1P18608 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.45□□□□□ -0.42
Hmgn1P18608 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn1P18608 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Hmgn1P18608 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.45□□□□□ -0.42
Hmgn1P18608 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.45□□□□□ -0.42
Hmgn1P18608 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn1P18608 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn1P18608 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.45□□□□□ -0.42
Hmgn1P18608 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn1P18608 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn1P18608 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn1P18608 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn1P18608 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn1P18608 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn1P18608 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn1P18608 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn1P18608 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.45□□□□□ -0.42
Hmgn1P18608 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn1P18608 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn1P18608 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn1P18608 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn1P18608 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn1P18608 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.44□□□□□ -0.42
Hmgn1P18608 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn1P18608 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn1P18608 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn1P18608 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Hmgn1P18608 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn1P18608 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.44□□□□□ -0.42
Hmgn1P18608 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Hmgn1P18608 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn1P18608 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn1P18608 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn1P18608 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.44□□□□□ -0.42
Hmgn1P18608 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Hmgn1P18608 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Hmgn1P18608 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Hmgn1P18608 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Hmgn1P18608 Gm5566-201ENSMUST00000116118 459 ntBASIC12.44□□□□□ -0.42
Hmgn1P18608 Gm13015-201ENSMUST00000118674 204 ntBASIC12.44□□□□□ -0.42
Hmgn1P18608 Gm1401-201ENSMUST00000122048 772 ntBASIC12.44□□□□□ -0.42
Hmgn1P18608 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn1P18608 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.44□□□□□ -0.42
Hmgn1P18608 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn1P18608 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.44□□□□□ -0.42
Hmgn1P18608 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.44□□□□□ -0.42
Hmgn1P18608 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn1P18608 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.44□□□□□ -0.42
Hmgn1P18608 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Hmgn1P18608 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Hmgn1P18608 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn1P18608 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Hmgn1P18608 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn1P18608 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn1P18608 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn1P18608 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Hmgn1P18608 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.44□□□□□ -0.42
Hmgn1P18608 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn1P18608 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Hmgn1P18608 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn1P18608 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn1P18608 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn1P18608 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Hmgn1P18608 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn1P18608 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn1P18608 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgn1P18608 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Hmgn1P18608 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn1P18608 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Hmgn1P18608 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn1P18608 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn1P18608 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn1P18608 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn1P18608 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Hmgn1P18608 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn1P18608 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.43□□□□□ -0.42
Hmgn1P18608 Gm15678-201ENSMUST00000117573 960 ntBASIC12.43□□□□□ -0.42
Hmgn1P18608 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Hmgn1P18608 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.43□□□□□ -0.42
Hmgn1P18608 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Hmgn1P18608 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.43□□□□□ -0.42
Hmgn1P18608 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn1P18608 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Hmgn1P18608 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms