Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hmga1P17095 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Hmga1P17095 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hmga1P17095 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Hmga1P17095 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hmga1P17095 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hmga1P17095 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hmga1P17095 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hmga1P17095 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hmga1P17095 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hmga1P17095 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hmga1P17095 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hmga1P17095 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hmga1P17095 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Hmga1P17095 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.83□□□□□ -0.2
Hmga1P17095 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmga1P17095 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmga1P17095 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmga1P17095 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmga1P17095 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmga1P17095 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
Hmga1P17095 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmga1P17095 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmga1P17095 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Hmga1P17095 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.83□□□□□ -0.2
Hmga1P17095 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.83□□□□□ -0.2
Hmga1P17095 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hmga1P17095 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.83□□□□□ -0.2
Hmga1P17095 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.83□□□□□ -0.2
Hmga1P17095 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.83□□□□□ -0.2
Hmga1P17095 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.83□□□□□ -0.2
Hmga1P17095 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hmga1P17095 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.83□□□□□ -0.2
Hmga1P17095 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.83□□□□□ -0.2
Hmga1P17095 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.83□□□□□ -0.2
Hmga1P17095 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hmga1P17095 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmga1P17095 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmga1P17095 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmga1P17095 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.83□□□□□ -0.2
Hmga1P17095 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmga1P17095 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmga1P17095 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hmga1P17095 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmga1P17095 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmga1P17095 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Hmga1P17095 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmga1P17095 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hmga1P17095 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmga1P17095 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmga1P17095 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmga1P17095 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hmga1P17095 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hmga1P17095 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.82□□□□□ -0.2
Hmga1P17095 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmga1P17095 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmga1P17095 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmga1P17095 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.82□□□□□ -0.2
Hmga1P17095 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Hmga1P17095 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmga1P17095 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hmga1P17095 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmga1P17095 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmga1P17095 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmga1P17095 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmga1P17095 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmga1P17095 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmga1P17095 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hmga1P17095 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmga1P17095 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmga1P17095 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.82□□□□□ -0.2
Hmga1P17095 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Hmga1P17095 Gm5187-201ENSMUST00000117317 991 ntBASIC13.82□□□□□ -0.2
Hmga1P17095 Gm11618-201ENSMUST00000117946 267 ntBASIC13.82□□□□□ -0.2
Hmga1P17095 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hmga1P17095 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Hmga1P17095 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.82□□□□□ -0.2
Hmga1P17095 Gm37922-201ENSMUST00000195596 455 ntBASIC13.82□□□□□ -0.2
Hmga1P17095 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.82□□□□□ -0.2
Hmga1P17095 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.82□□□□□ -0.2
Hmga1P17095 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hmga1P17095 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmga1P17095 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmga1P17095 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.82□□□□□ -0.2
Hmga1P17095 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmga1P17095 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.82□□□□□ -0.2
Hmga1P17095 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.82□□□□□ -0.2
Hmga1P17095 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmga1P17095 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmga1P17095 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmga1P17095 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Hmga1P17095 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmga1P17095 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmga1P17095 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmga1P17095 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmga1P17095 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hmga1P17095 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmga1P17095 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmga1P17095 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmga1P17095 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms