Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
PtcraP0C6B2 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
PtcraP0C6B2 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.85□□□□□ -0.51
PtcraP0C6B2 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.85□□□□□ -0.51
PtcraP0C6B2 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
PtcraP0C6B2 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
PtcraP0C6B2 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
PtcraP0C6B2 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
PtcraP0C6B2 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
PtcraP0C6B2 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PtcraP0C6B2 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
PtcraP0C6B2 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PtcraP0C6B2 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PtcraP0C6B2 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.84□□□□□ -0.51
PtcraP0C6B2 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PtcraP0C6B2 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
PtcraP0C6B2 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PtcraP0C6B2 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
PtcraP0C6B2 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
PtcraP0C6B2 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
PtcraP0C6B2 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
PtcraP0C6B2 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PtcraP0C6B2 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PtcraP0C6B2 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
PtcraP0C6B2 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PtcraP0C6B2 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PtcraP0C6B2 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.84□□□□□ -0.51
PtcraP0C6B2 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
PtcraP0C6B2 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
PtcraP0C6B2 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
PtcraP0C6B2 Gm26464-201ENSMUST00000157094 305 ntBASIC11.84□□□□□ -0.51
PtcraP0C6B2 Gm16215-201ENSMUST00000161990 637 ntBASIC11.84□□□□□ -0.51
PtcraP0C6B2 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
PtcraP0C6B2 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
PtcraP0C6B2 Gm27437-201ENSMUST00000183429 107 ntBASIC11.84□□□□□ -0.51
PtcraP0C6B2 Mir6977-201ENSMUST00000184960 64 ntBASIC11.84□□□□□ -0.51
PtcraP0C6B2 Gm10576-201ENSMUST00000191927 825 ntBASIC11.84□□□□□ -0.51
PtcraP0C6B2 Gm38144-201ENSMUST00000192790 465 ntBASIC11.84□□□□□ -0.51
PtcraP0C6B2 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.84□□□□□ -0.51
PtcraP0C6B2 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.84□□□□□ -0.51
PtcraP0C6B2 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
PtcraP0C6B2 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
PtcraP0C6B2 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
PtcraP0C6B2 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
PtcraP0C6B2 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.84□□□□□ -0.51
PtcraP0C6B2 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PtcraP0C6B2 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PtcraP0C6B2 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PtcraP0C6B2 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.84□□□□□ -0.51
PtcraP0C6B2 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.84□□□□□ -0.51
PtcraP0C6B2 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
PtcraP0C6B2 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.84□□□□□ -0.51
PtcraP0C6B2 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
PtcraP0C6B2 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PtcraP0C6B2 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PtcraP0C6B2 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
PtcraP0C6B2 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PtcraP0C6B2 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.84□□□□□ -0.51
PtcraP0C6B2 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.84□□□□□ -0.51
PtcraP0C6B2 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PtcraP0C6B2 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
PtcraP0C6B2 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
PtcraP0C6B2 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PtcraP0C6B2 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
PtcraP0C6B2 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PtcraP0C6B2 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PtcraP0C6B2 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
PtcraP0C6B2 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
PtcraP0C6B2 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
PtcraP0C6B2 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PtcraP0C6B2 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PtcraP0C6B2 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PtcraP0C6B2 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
PtcraP0C6B2 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
PtcraP0C6B2 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PtcraP0C6B2 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
PtcraP0C6B2 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PtcraP0C6B2 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
PtcraP0C6B2 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PtcraP0C6B2 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.83□□□□□ -0.52
PtcraP0C6B2 Gm12485-201ENSMUST00000119641 291 ntBASIC11.83□□□□□ -0.52
PtcraP0C6B2 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
PtcraP0C6B2 Gm43094-201ENSMUST00000196549 921 ntBASIC11.83□□□□□ -0.52
PtcraP0C6B2 Gm42612-201ENSMUST00000197986 623 ntBASIC11.83□□□□□ -0.52
PtcraP0C6B2 Gm43170-201ENSMUST00000199827 612 ntBASIC11.83□□□□□ -0.52
PtcraP0C6B2 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.83□□□□□ -0.52
PtcraP0C6B2 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.83□□□□□ -0.52
PtcraP0C6B2 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.83□□□□□ -0.52
PtcraP0C6B2 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.83□□□□□ -0.52
PtcraP0C6B2 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
PtcraP0C6B2 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
PtcraP0C6B2 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PtcraP0C6B2 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PtcraP0C6B2 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
PtcraP0C6B2 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
PtcraP0C6B2 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
PtcraP0C6B2 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PtcraP0C6B2 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
PtcraP0C6B2 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PtcraP0C6B2 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms