Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc8P09025 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.37□□□□□ -0.11
Hoxc8P09025 Gm18584-201ENSMUST00000203098 964 ntBASIC14.37□□□□□ -0.11
Hoxc8P09025 Gm10608-202ENSMUST00000213924 676 ntBASIC14.37□□□□□ -0.11
Hoxc8P09025 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.37□□□□□ -0.11
Hoxc8P09025 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc8P09025 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc8P09025 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc8P09025 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc8P09025 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.37□□□□□ -0.11
Hoxc8P09025 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc8P09025 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc8P09025 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc8P09025 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.37□□□□□ -0.11
Hoxc8P09025 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc8P09025 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Hoxc8P09025 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Hoxc8P09025 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc8P09025 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc8P09025 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc8P09025 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Hoxc8P09025 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Hoxc8P09025 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Hoxc8P09025 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc8P09025 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc8P09025 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc8P09025 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc8P09025 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc8P09025 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.36□□□□□ -0.11
Hoxc8P09025 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc8P09025 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc8P09025 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc8P09025 Snord83b-201ENSMUST00000104546 94 ntBASIC14.36□□□□□ -0.11
Hoxc8P09025 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc8P09025 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc8P09025 Gm26185-201ENSMUST00000157692 266 ntBASIC14.36□□□□□ -0.11
Hoxc8P09025 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc8P09025 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.36□□□□□ -0.11
Hoxc8P09025 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC14.36□□□□□ -0.11
Hoxc8P09025 AC132384.14-201ENSMUST00000219346 1147 ntBASIC14.36□□□□□ -0.11
Hoxc8P09025 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.36□□□□□ -0.11
Hoxc8P09025 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc8P09025 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
Hoxc8P09025 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc8P09025 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc8P09025 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc8P09025 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hoxc8P09025 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc8P09025 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hoxc8P09025 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc8P09025 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc8P09025 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.35□□□□□ -0.11
Hoxc8P09025 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hoxc8P09025 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc8P09025 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc8P09025 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc8P09025 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc8P09025 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc8P09025 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc8P09025 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc8P09025 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc8P09025 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc8P09025 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Hoxc8P09025 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc8P09025 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc8P09025 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.35□□□□□ -0.11
Hoxc8P09025 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Hoxc8P09025 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Hoxc8P09025 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.35□□□□□ -0.11
Hoxc8P09025 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc8P09025 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc8P09025 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc8P09025 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc8P09025 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc8P09025 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc8P09025 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
Hoxc8P09025 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc8P09025 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc8P09025 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc8P09025 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc8P09025 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc8P09025 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.35□□□□□ -0.11
Hoxc8P09025 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc8P09025 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc8P09025 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC14.34□□□□□ -0.11
Hoxc8P09025 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.34□□□□□ -0.11
Hoxc8P09025 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc8P09025 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc8P09025 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc8P09025 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc8P09025 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc8P09025 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc8P09025 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc8P09025 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc8P09025 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Hoxc8P09025 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc8P09025 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc8P09025 Gm15808-201ENSMUST00000119046 604 ntBASIC14.34□□□□□ -0.11
Hoxc8P09025 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.34□□□□□ -0.11
Hoxc8P09025 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms