Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PrnpP04925 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PrnpP04925 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PrnpP04925 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PrnpP04925 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PrnpP04925 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PrnpP04925 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PrnpP04925 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PrnpP04925 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PrnpP04925 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PrnpP04925 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PrnpP04925 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PrnpP04925 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PrnpP04925 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PrnpP04925 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PrnpP04925 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.04□□□□□ -0.16
PrnpP04925 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14.04□□□□□ -0.16
PrnpP04925 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
PrnpP04925 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PrnpP04925 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PrnpP04925 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC14.04□□□□□ -0.16
PrnpP04925 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.04□□□□□ -0.16
PrnpP04925 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.04□□□□□ -0.16
PrnpP04925 Olfr284-202ENSMUST00000206647 966 ntBASIC14.04□□□□□ -0.16
PrnpP04925 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC14.04□□□□□ -0.16
PrnpP04925 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PrnpP04925 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PrnpP04925 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PrnpP04925 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PrnpP04925 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PrnpP04925 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PrnpP04925 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PrnpP04925 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.04□□□□□ -0.16
PrnpP04925 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.04□□□□□ -0.16
PrnpP04925 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PrnpP04925 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PrnpP04925 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.03□□□□□ -0.16
PrnpP04925 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.03□□□□□ -0.16
PrnpP04925 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrnpP04925 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrnpP04925 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PrnpP04925 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrnpP04925 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrnpP04925 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrnpP04925 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrnpP04925 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PrnpP04925 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrnpP04925 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
PrnpP04925 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrnpP04925 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PrnpP04925 Gm12241-201ENSMUST00000118330 726 ntBASIC14.03□□□□□ -0.16
PrnpP04925 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PrnpP04925 Gm29396-201ENSMUST00000185659 716 ntBASIC14.03□□□□□ -0.16
PrnpP04925 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.03□□□□□ -0.16
PrnpP04925 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PrnpP04925 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC14.03□□□□□ -0.16
PrnpP04925 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrnpP04925 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
PrnpP04925 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrnpP04925 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
PrnpP04925 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PrnpP04925 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.03□□□□□ -0.16
PrnpP04925 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PrnpP04925 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.03□□□□□ -0.16
PrnpP04925 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.03□□□□□ -0.16
PrnpP04925 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrnpP04925 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrnpP04925 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrnpP04925 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrnpP04925 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrnpP04925 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
PrnpP04925 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrnpP04925 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PrnpP04925 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PrnpP04925 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PrnpP04925 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
PrnpP04925 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
PrnpP04925 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PrnpP04925 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
PrnpP04925 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PrnpP04925 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PrnpP04925 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PrnpP04925 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PrnpP04925 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PrnpP04925 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.02□□□□□ -0.17
PrnpP04925 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PrnpP04925 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.02□□□□□ -0.17
PrnpP04925 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PrnpP04925 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.02□□□□□ -0.17
PrnpP04925 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.02□□□□□ -0.17
PrnpP04925 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.02□□□□□ -0.17
PrnpP04925 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.02□□□□□ -0.17
PrnpP04925 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.02□□□□□ -0.17
PrnpP04925 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC14.02□□□□□ -0.17
PrnpP04925 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PrnpP04925 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PrnpP04925 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PrnpP04925 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
PrnpP04925 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PrnpP04925 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms