Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Col4a1P02463 Gm38297-201ENSMUST00000195122 1057 ntBASIC16.4■□□□□ 0.22
Col4a1P02463 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a1P02463 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a1P02463 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Col4a1P02463 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Col4a1P02463 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Col4a1P02463 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a1P02463 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a1P02463 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a1P02463 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.4■□□□□ 0.22
Col4a1P02463 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Col4a1P02463 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a1P02463 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a1P02463 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a1P02463 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a1P02463 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a1P02463 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a1P02463 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a1P02463 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a1P02463 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a1P02463 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Col4a1P02463 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a1P02463 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Col4a1P02463 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a1P02463 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC16.4■□□□□ 0.22
Col4a1P02463 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a1P02463 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a1P02463 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a1P02463 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Col4a1P02463 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a1P02463 Gm11531-201ENSMUST00000117614 555 ntBASIC16.4■□□□□ 0.22
Col4a1P02463 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a1P02463 Gm27320-201ENSMUST00000184892 109 ntBASIC16.4■□□□□ 0.22
Col4a1P02463 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a1P02463 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a1P02463 n-R5s77-201ENSMUST00000083757 119 ntBASIC16.4■□□□□ 0.22
Col4a1P02463 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Col4a1P02463 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Col4a1P02463 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col4a1P02463 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Col4a1P02463 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC16.39■□□□□ 0.21
Col4a1P02463 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col4a1P02463 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC16.39■□□□□ 0.21
Col4a1P02463 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Col4a1P02463 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col4a1P02463 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col4a1P02463 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col4a1P02463 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col4a1P02463 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Col4a1P02463 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col4a1P02463 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col4a1P02463 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col4a1P02463 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC16.39■□□□□ 0.21
Col4a1P02463 Gm23270-201ENSMUST00000104055 131 ntBASIC16.39■□□□□ 0.21
Col4a1P02463 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col4a1P02463 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC16.39■□□□□ 0.21
Col4a1P02463 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col4a1P02463 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC16.39■□□□□ 0.21
Col4a1P02463 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC16.39■□□□□ 0.21
Col4a1P02463 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC16.39■□□□□ 0.21
Col4a1P02463 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col4a1P02463 Gm3786-201ENSMUST00000202659 378 ntBASIC16.39■□□□□ 0.21
Col4a1P02463 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC16.39■□□□□ 0.21
Col4a1P02463 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC16.39■□□□□ 0.21
Col4a1P02463 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC16.39■□□□□ 0.21
Col4a1P02463 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col4a1P02463 AC167669.2-201ENSMUST00000224417 1620 ntBASIC16.39■□□□□ 0.21
Col4a1P02463 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Col4a1P02463 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Col4a1P02463 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col4a1P02463 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col4a1P02463 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col4a1P02463 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col4a1P02463 Gm15897-201ENSMUST00000117770 1486 ntBASIC16.38■□□□□ 0.21
Col4a1P02463 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col4a1P02463 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col4a1P02463 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col4a1P02463 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col4a1P02463 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col4a1P02463 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC16.38■□□□□ 0.21
Col4a1P02463 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Col4a1P02463 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col4a1P02463 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col4a1P02463 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC16.38■□□□□ 0.21
Col4a1P02463 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.38■□□□□ 0.21
Col4a1P02463 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col4a1P02463 AC139054.1-201ENSMUST00000226898 1598 ntBASIC16.38■□□□□ 0.21
Col4a1P02463 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col4a1P02463 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col4a1P02463 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col4a1P02463 Gm19221-201ENSMUST00000221827 1477 ntBASIC16.38■□□□□ 0.21
Col4a1P02463 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col4a1P02463 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col4a1P02463 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Col4a1P02463 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col4a1P02463 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col4a1P02463 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col4a1P02463 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col4a1P02463 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms