Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1aO89116 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.69□□□□□ -0.06
Vti1aO89116 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.69□□□□□ -0.06
Vti1aO89116 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1aO89116 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1aO89116 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1aO89116 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1aO89116 Gm12390-201ENSMUST00000117897 397 ntBASIC14.69□□□□□ -0.06
Vti1aO89116 Gm13385-201ENSMUST00000121089 220 ntBASIC14.69□□□□□ -0.06
Vti1aO89116 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.69□□□□□ -0.06
Vti1aO89116 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1aO89116 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
Vti1aO89116 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.69□□□□□ -0.06
Vti1aO89116 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1aO89116 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1aO89116 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1aO89116 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Vti1aO89116 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Vti1aO89116 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1aO89116 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1aO89116 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1aO89116 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Vti1aO89116 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1aO89116 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Vti1aO89116 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Vti1aO89116 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1aO89116 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.69□□□□□ -0.06
Vti1aO89116 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1aO89116 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1aO89116 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1aO89116 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1aO89116 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1aO89116 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vti1aO89116 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vti1aO89116 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vti1aO89116 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vti1aO89116 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vti1aO89116 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.68□□□□□ -0.06
Vti1aO89116 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vti1aO89116 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vti1aO89116 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vti1aO89116 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.68□□□□□ -0.06
Vti1aO89116 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vti1aO89116 Gm15240-201ENSMUST00000118156 720 ntBASIC14.68□□□□□ -0.06
Vti1aO89116 Gm11524-201ENSMUST00000119349 807 ntBASIC14.68□□□□□ -0.06
Vti1aO89116 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.68□□□□□ -0.06
Vti1aO89116 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.68□□□□□ -0.06
Vti1aO89116 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.68□□□□□ -0.06
Vti1aO89116 Gm19078-201ENSMUST00000206311 727 ntBASIC14.68□□□□□ -0.06
Vti1aO89116 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC14.68□□□□□ -0.06
Vti1aO89116 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vti1aO89116 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vti1aO89116 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Vti1aO89116 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Vti1aO89116 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vti1aO89116 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Vti1aO89116 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vti1aO89116 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vti1aO89116 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vti1aO89116 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vti1aO89116 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vti1aO89116 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vti1aO89116 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Vti1aO89116 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vti1aO89116 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vti1aO89116 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vti1aO89116 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Vti1aO89116 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vti1aO89116 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Vti1aO89116 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Vti1aO89116 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vti1aO89116 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.67□□□□□ -0.06
Vti1aO89116 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.67□□□□□ -0.06
Vti1aO89116 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Vti1aO89116 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.67□□□□□ -0.06
Vti1aO89116 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.67□□□□□ -0.06
Vti1aO89116 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.67□□□□□ -0.06
Vti1aO89116 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.67□□□□□ -0.06
Vti1aO89116 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vti1aO89116 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vti1aO89116 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vti1aO89116 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vti1aO89116 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.67□□□□□ -0.06
Vti1aO89116 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vti1aO89116 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vti1aO89116 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vti1aO89116 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vti1aO89116 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vti1aO89116 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vti1aO89116 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vti1aO89116 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vti1aO89116 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Vti1aO89116 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vti1aO89116 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Vti1aO89116 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vti1aO89116 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vti1aO89116 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vti1aO89116 Gm12928-201ENSMUST00000117115 573 ntBASIC14.66□□□□□ -0.06
Vti1aO89116 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vti1aO89116 Gm12957-201ENSMUST00000117835 377 ntBASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms