Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CopeO89079 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CopeO89079 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CopeO89079 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CopeO89079 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CopeO89079 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CopeO89079 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CopeO89079 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CopeO89079 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CopeO89079 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CopeO89079 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CopeO89079 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CopeO89079 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CopeO89079 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.05□□□□□ -0.16
CopeO89079 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
CopeO89079 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CopeO89079 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CopeO89079 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CopeO89079 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopeO89079 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopeO89079 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopeO89079 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopeO89079 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopeO89079 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopeO89079 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopeO89079 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CopeO89079 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CopeO89079 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopeO89079 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.04□□□□□ -0.16
CopeO89079 Gm14494-201ENSMUST00000118786 435 ntBASIC14.04□□□□□ -0.16
CopeO89079 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopeO89079 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CopeO89079 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CopeO89079 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.04□□□□□ -0.16
CopeO89079 Gm18889-201ENSMUST00000174284 929 ntBASIC14.04□□□□□ -0.16
CopeO89079 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.04□□□□□ -0.16
CopeO89079 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CopeO89079 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CopeO89079 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopeO89079 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.04□□□□□ -0.16
CopeO89079 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.04□□□□□ -0.16
CopeO89079 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopeO89079 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopeO89079 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CopeO89079 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CopeO89079 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CopeO89079 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopeO89079 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopeO89079 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
CopeO89079 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CopeO89079 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopeO89079 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CopeO89079 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CopeO89079 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopeO89079 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopeO89079 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopeO89079 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopeO89079 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopeO89079 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopeO89079 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopeO89079 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopeO89079 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.03□□□□□ -0.16
CopeO89079 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.03□□□□□ -0.16
CopeO89079 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopeO89079 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopeO89079 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopeO89079 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopeO89079 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CopeO89079 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CopeO89079 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopeO89079 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopeO89079 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopeO89079 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CopeO89079 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CopeO89079 Gm15467-201ENSMUST00000120582 445 ntBASIC14.03□□□□□ -0.16
CopeO89079 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CopeO89079 Gm27494-201ENSMUST00000184735 189 ntBASIC14.03□□□□□ -0.16
CopeO89079 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.03□□□□□ -0.16
CopeO89079 Gm6916-202ENSMUST00000205523 195 ntBASIC14.03□□□□□ -0.16
CopeO89079 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopeO89079 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CopeO89079 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopeO89079 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopeO89079 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CopeO89079 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopeO89079 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CopeO89079 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopeO89079 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopeO89079 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopeO89079 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopeO89079 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopeO89079 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopeO89079 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopeO89079 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CopeO89079 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopeO89079 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CopeO89079 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopeO89079 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopeO89079 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CopeO89079 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms