Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.55□□□□□ -0.24
Pknox1O70477 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.55□□□□□ -0.24
Pknox1O70477 Gm18041-201ENSMUST00000218210 618 ntBASIC13.55□□□□□ -0.24
Pknox1O70477 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pknox1O70477 Gm8396-201ENSMUST00000057361 823 ntBASIC13.55□□□□□ -0.24
Pknox1O70477 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pknox1O70477 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pknox1O70477 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pknox1O70477 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pknox1O70477 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pknox1O70477 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pknox1O70477 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pknox1O70477 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.55□□□□□ -0.24
Pknox1O70477 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pknox1O70477 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pknox1O70477 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Pknox1O70477 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pknox1O70477 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Pknox1O70477 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Pknox1O70477 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pknox1O70477 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pknox1O70477 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pknox1O70477 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pknox1O70477 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pknox1O70477 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pknox1O70477 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pknox1O70477 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pknox1O70477 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pknox1O70477 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pknox1O70477 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pknox1O70477 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pknox1O70477 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pknox1O70477 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pknox1O70477 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pknox1O70477 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pknox1O70477 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pknox1O70477 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pknox1O70477 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.54□□□□□ -0.24
Pknox1O70477 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.54□□□□□ -0.24
Pknox1O70477 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.54□□□□□ -0.24
Pknox1O70477 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.54□□□□□ -0.24
Pknox1O70477 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pknox1O70477 Gm4804-201ENSMUST00000182234 999 ntBASIC13.54□□□□□ -0.24
Pknox1O70477 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.54□□□□□ -0.24
Pknox1O70477 Gm46209-201ENSMUST00000217912 553 ntBASIC13.54□□□□□ -0.24
Pknox1O70477 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Pknox1O70477 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pknox1O70477 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Pknox1O70477 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pknox1O70477 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.54□□□□□ -0.24
Pknox1O70477 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pknox1O70477 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Pknox1O70477 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pknox1O70477 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pknox1O70477 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pknox1O70477 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pknox1O70477 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pknox1O70477 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Pknox1O70477 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pknox1O70477 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pknox1O70477 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Pknox1O70477 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Pknox1O70477 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.53□□□□□ -0.24
Pknox1O70477 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pknox1O70477 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.53□□□□□ -0.24
Pknox1O70477 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pknox1O70477 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pknox1O70477 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pknox1O70477 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pknox1O70477 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.53□□□□□ -0.24
Pknox1O70477 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.53□□□□□ -0.24
Pknox1O70477 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pknox1O70477 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pknox1O70477 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Pknox1O70477 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pknox1O70477 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.53□□□□□ -0.24
Pknox1O70477 Gm15393-201ENSMUST00000120499 219 ntBASIC13.53□□□□□ -0.24
Pknox1O70477 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.53□□□□□ -0.24
Pknox1O70477 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pknox1O70477 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.53□□□□□ -0.24
Pknox1O70477 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.53□□□□□ -0.24
Pknox1O70477 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pknox1O70477 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.53□□□□□ -0.24
Pknox1O70477 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.53□□□□□ -0.24
Pknox1O70477 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pknox1O70477 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Pknox1O70477 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pknox1O70477 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pknox1O70477 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pknox1O70477 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Pknox1O70477 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pknox1O70477 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Pknox1O70477 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pknox1O70477 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pknox1O70477 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pknox1O70477 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pknox1O70477 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pknox1O70477 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pknox1O70477 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pknox1O70477 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms