Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Gm13385-201ENSMUST00000121089 220 ntBASIC16.19■□□□□ 0.18
Smarce1O54941 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Smarce1O54941 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Smarce1O54941 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Smarce1O54941 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Smarce1O54941 Gm5779-201ENSMUST00000218467 910 ntBASIC16.19■□□□□ 0.18
Smarce1O54941 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarce1O54941 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarce1O54941 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarce1O54941 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarce1O54941 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarce1O54941 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarce1O54941 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarce1O54941 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarce1O54941 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Smarce1O54941 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarce1O54941 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarce1O54941 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarce1O54941 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarce1O54941 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smarce1O54941 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarce1O54941 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarce1O54941 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarce1O54941 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smarce1O54941 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smarce1O54941 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarce1O54941 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smarce1O54941 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarce1O54941 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarce1O54941 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Smarce1O54941 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarce1O54941 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Smarce1O54941 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smarce1O54941 Gm15393-201ENSMUST00000120499 219 ntBASIC16.18■□□□□ 0.18
Smarce1O54941 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.18■□□□□ 0.18
Smarce1O54941 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Smarce1O54941 Gm24513-201ENSMUST00000174964 138 ntBASIC16.18■□□□□ 0.18
Smarce1O54941 Gm24420-201ENSMUST00000176676 59 ntBASIC16.18■□□□□ 0.18
Smarce1O54941 Gm27397-201ENSMUST00000184997 107 ntBASIC16.18■□□□□ 0.18
Smarce1O54941 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smarce1O54941 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smarce1O54941 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.18■□□□□ 0.18
Smarce1O54941 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC16.18■□□□□ 0.18
Smarce1O54941 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.18■□□□□ 0.18
Smarce1O54941 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarce1O54941 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarce1O54941 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarce1O54941 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Smarce1O54941 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarce1O54941 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarce1O54941 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC16.18■□□□□ 0.18
Smarce1O54941 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarce1O54941 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarce1O54941 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smarce1O54941 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarce1O54941 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarce1O54941 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Smarce1O54941 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarce1O54941 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smarce1O54941 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarce1O54941 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smarce1O54941 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smarce1O54941 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC16.17■□□□□ 0.18
Smarce1O54941 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarce1O54941 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarce1O54941 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarce1O54941 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Smarce1O54941 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
Smarce1O54941 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Smarce1O54941 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarce1O54941 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Smarce1O54941 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarce1O54941 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarce1O54941 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.17■□□□□ 0.18
Smarce1O54941 Gm25144-201ENSMUST00000179561 110 ntBASIC16.17■□□□□ 0.18
Smarce1O54941 Gm25352-201ENSMUST00000179815 110 ntBASIC16.17■□□□□ 0.18
Smarce1O54941 Gm27622-201ENSMUST00000183779 60 ntBASIC16.17■□□□□ 0.18
Smarce1O54941 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.17■□□□□ 0.18
Smarce1O54941 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.17■□□□□ 0.18
Smarce1O54941 Shd-206ENSMUST00000225145 998 ntBASIC16.17■□□□□ 0.18
Smarce1O54941 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Smarce1O54941 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Smarce1O54941 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarce1O54941 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarce1O54941 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarce1O54941 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarce1O54941 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Smarce1O54941 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarce1O54941 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarce1O54941 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Smarce1O54941 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarce1O54941 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarce1O54941 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC16.16■□□□□ 0.18
Smarce1O54941 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarce1O54941 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smarce1O54941 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smarce1O54941 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarce1O54941 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC16.16■□□□□ 0.18
Smarce1O54941 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarce1O54941 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms