Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sdc4O35988 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc4O35988 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc4O35988 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Sdc4O35988 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc4O35988 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc4O35988 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.01□□□□□ -0.17
Sdc4O35988 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc4O35988 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc4O35988 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc4O35988 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc4O35988 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc4O35988 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.01□□□□□ -0.17
Sdc4O35988 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sdc4O35988 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sdc4O35988 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sdc4O35988 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Sdc4O35988 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.01□□□□□ -0.17
Sdc4O35988 Gm18473-201ENSMUST00000220543 868 ntBASIC14.01□□□□□ -0.17
Sdc4O35988 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Sdc4O35988 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc4O35988 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc4O35988 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc4O35988 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc4O35988 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc4O35988 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc4O35988 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.01□□□□□ -0.17
Sdc4O35988 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Sdc4O35988 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sdc4O35988 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sdc4O35988 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14□□□□□ -0.17
Sdc4O35988 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Sdc4O35988 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sdc4O35988 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sdc4O35988 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14□□□□□ -0.17
Sdc4O35988 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Sdc4O35988 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14□□□□□ -0.17
Sdc4O35988 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14□□□□□ -0.17
Sdc4O35988 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14□□□□□ -0.17
Sdc4O35988 AC153962.4-201ENSMUST00000217878 242 ntBASIC14□□□□□ -0.17
Sdc4O35988 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14□□□□□ -0.17
Sdc4O35988 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sdc4O35988 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sdc4O35988 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sdc4O35988 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14□□□□□ -0.17
Sdc4O35988 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sdc4O35988 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sdc4O35988 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Sdc4O35988 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sdc4O35988 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14□□□□□ -0.17
Sdc4O35988 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sdc4O35988 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sdc4O35988 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14□□□□□ -0.17
Sdc4O35988 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc4O35988 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc4O35988 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc4O35988 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc4O35988 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc4O35988 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc4O35988 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc4O35988 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Sdc4O35988 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc4O35988 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc4O35988 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.99□□□□□ -0.17
Sdc4O35988 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc4O35988 Gm13612-201ENSMUST00000119276 390 ntBASIC13.99□□□□□ -0.17
Sdc4O35988 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.99□□□□□ -0.17
Sdc4O35988 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc4O35988 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc4O35988 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Sdc4O35988 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc4O35988 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.99□□□□□ -0.17
Sdc4O35988 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.99□□□□□ -0.17
Sdc4O35988 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.99□□□□□ -0.17
Sdc4O35988 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.99□□□□□ -0.17
Sdc4O35988 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc4O35988 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Sdc4O35988 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc4O35988 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.99□□□□□ -0.17
Sdc4O35988 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc4O35988 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc4O35988 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc4O35988 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc4O35988 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Sdc4O35988 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc4O35988 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc4O35988 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.99□□□□□ -0.17
Sdc4O35988 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sdc4O35988 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sdc4O35988 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sdc4O35988 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sdc4O35988 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.98□□□□□ -0.17
Sdc4O35988 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Sdc4O35988 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Sdc4O35988 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sdc4O35988 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sdc4O35988 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sdc4O35988 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.98□□□□□ -0.17
Sdc4O35988 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sdc4O35988 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms