Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Nr1i3O35627 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1i3O35627 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1i3O35627 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1i3O35627 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1i3O35627 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1i3O35627 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.65□□□□□ -0.06
Nr1i3O35627 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1i3O35627 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1i3O35627 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1i3O35627 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
Nr1i3O35627 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Nr1i3O35627 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1i3O35627 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1i3O35627 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1i3O35627 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1i3O35627 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1i3O35627 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Nr1i3O35627 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1i3O35627 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.65□□□□□ -0.06
Nr1i3O35627 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1i3O35627 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.65□□□□□ -0.06
Nr1i3O35627 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1i3O35627 Gm22175-201ENSMUST00000175007 78 ntBASIC14.65□□□□□ -0.06
Nr1i3O35627 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.65□□□□□ -0.06
Nr1i3O35627 Gm6888-201ENSMUST00000221983 706 ntBASIC14.65□□□□□ -0.06
Nr1i3O35627 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1i3O35627 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1i3O35627 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1i3O35627 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1i3O35627 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Nr1i3O35627 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1i3O35627 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Nr1i3O35627 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.65□□□□□ -0.06
Nr1i3O35627 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.65□□□□□ -0.06
Nr1i3O35627 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1i3O35627 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1i3O35627 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1i3O35627 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1i3O35627 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1i3O35627 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Nr1i3O35627 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Nr1i3O35627 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1i3O35627 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1i3O35627 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1i3O35627 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.64□□□□□ -0.07
Nr1i3O35627 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1i3O35627 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1i3O35627 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1i3O35627 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1i3O35627 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1i3O35627 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1i3O35627 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1i3O35627 Gm23935-201ENSMUST00000102303 57 ntBASIC14.64□□□□□ -0.07
Nr1i3O35627 Gm24270-201ENSMUST00000102326 57 ntBASIC14.64□□□□□ -0.07
Nr1i3O35627 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.64□□□□□ -0.07
Nr1i3O35627 Gm24245-201ENSMUST00000157318 57 ntBASIC14.64□□□□□ -0.07
Nr1i3O35627 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1i3O35627 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Nr1i3O35627 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1i3O35627 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Nr1i3O35627 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1i3O35627 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1i3O35627 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1i3O35627 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Nr1i3O35627 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1i3O35627 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.64□□□□□ -0.07
Nr1i3O35627 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1i3O35627 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1i3O35627 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1i3O35627 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1i3O35627 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1i3O35627 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.64□□□□□ -0.07
Nr1i3O35627 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Nr1i3O35627 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.64□□□□□ -0.07
Nr1i3O35627 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Nr1i3O35627 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1i3O35627 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Nr1i3O35627 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Nr1i3O35627 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Nr1i3O35627 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nr1i3O35627 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nr1i3O35627 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nr1i3O35627 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nr1i3O35627 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nr1i3O35627 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nr1i3O35627 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nr1i3O35627 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Nr1i3O35627 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nr1i3O35627 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nr1i3O35627 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Nr1i3O35627 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nr1i3O35627 Mir874-201ENSMUST00000104769 76 ntBASIC14.63□□□□□ -0.07
Nr1i3O35627 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nr1i3O35627 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
Nr1i3O35627 Gm13453-201ENSMUST00000118708 357 ntBASIC14.63□□□□□ -0.07
Nr1i3O35627 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.63□□□□□ -0.07
Nr1i3O35627 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nr1i3O35627 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.63□□□□□ -0.07
Nr1i3O35627 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms