Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Efnb3O35393 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Efnb3O35393 Gm24513-201ENSMUST00000174964 138 ntBASIC10.76□□□□□ -0.69
Efnb3O35393 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Efnb3O35393 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Efnb3O35393 Gm29310-201ENSMUST00000185468 696 ntBASIC10.76□□□□□ -0.69
Efnb3O35393 Gm21825-201ENSMUST00000185728 696 ntBASIC10.76□□□□□ -0.69
Efnb3O35393 Gm29109-201ENSMUST00000185895 696 ntBASIC10.76□□□□□ -0.69
Efnb3O35393 Gm21896-201ENSMUST00000186520 696 ntBASIC10.76□□□□□ -0.69
Efnb3O35393 Gm21873-201ENSMUST00000186728 696 ntBASIC10.76□□□□□ -0.69
Efnb3O35393 Gm21794-201ENSMUST00000187056 696 ntBASIC10.76□□□□□ -0.69
Efnb3O35393 Gm21880-201ENSMUST00000187275 696 ntBASIC10.76□□□□□ -0.69
Efnb3O35393 Gm21826-201ENSMUST00000187451 696 ntBASIC10.76□□□□□ -0.69
Efnb3O35393 Gm21198-201ENSMUST00000188393 696 ntBASIC10.76□□□□□ -0.69
Efnb3O35393 Gm21749-201ENSMUST00000189343 696 ntBASIC10.76□□□□□ -0.69
Efnb3O35393 Gm21901-201ENSMUST00000189568 696 ntBASIC10.76□□□□□ -0.69
Efnb3O35393 Gm29424-201ENSMUST00000189716 696 ntBASIC10.76□□□□□ -0.69
Efnb3O35393 Gm28599-201ENSMUST00000189838 694 ntBASIC10.76□□□□□ -0.69
Efnb3O35393 Gm21867-201ENSMUST00000189917 696 ntBASIC10.76□□□□□ -0.69
Efnb3O35393 Gm29269-201ENSMUST00000190087 696 ntBASIC10.76□□□□□ -0.69
Efnb3O35393 Gm21722-201ENSMUST00000190153 696 ntBASIC10.76□□□□□ -0.69
Efnb3O35393 Gm28423-201ENSMUST00000190701 696 ntBASIC10.76□□□□□ -0.69
Efnb3O35393 Gm21899-201ENSMUST00000190745 696 ntBASIC10.76□□□□□ -0.69
Efnb3O35393 Gm21910-201ENSMUST00000191163 696 ntBASIC10.76□□□□□ -0.69
Efnb3O35393 Gm21849-201ENSMUST00000191571 696 ntBASIC10.76□□□□□ -0.69
Efnb3O35393 Gm28678-201ENSMUST00000191593 696 ntBASIC10.76□□□□□ -0.69
Efnb3O35393 Gm20910-201ENSMUST00000193268 696 ntBASIC10.76□□□□□ -0.69
Efnb3O35393 Gm21871-201ENSMUST00000194621 696 ntBASIC10.76□□□□□ -0.69
Efnb3O35393 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Efnb3O35393 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC10.76□□□□□ -0.69
Efnb3O35393 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC10.76□□□□□ -0.69
Efnb3O35393 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC10.76□□□□□ -0.69
Efnb3O35393 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC10.76□□□□□ -0.69
Efnb3O35393 AC225888.1-201ENSMUST00000227184 728 ntBASIC10.76□□□□□ -0.69
Efnb3O35393 AC149294.4-201ENSMUST00000227870 882 ntBASIC10.76□□□□□ -0.69
Efnb3O35393 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Efnb3O35393 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Efnb3O35393 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Efnb3O35393 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Efnb3O35393 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Efnb3O35393 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Efnb3O35393 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC10.76□□□□□ -0.69
Efnb3O35393 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Efnb3O35393 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Efnb3O35393 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Efnb3O35393 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Efnb3O35393 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Efnb3O35393 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Efnb3O35393 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Efnb3O35393 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Efnb3O35393 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Efnb3O35393 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Efnb3O35393 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Efnb3O35393 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Efnb3O35393 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Efnb3O35393 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Efnb3O35393 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Efnb3O35393 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Efnb3O35393 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Efnb3O35393 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC10.75□□□□□ -0.69
Efnb3O35393 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Efnb3O35393 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Efnb3O35393 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Efnb3O35393 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Efnb3O35393 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Efnb3O35393 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Efnb3O35393 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Efnb3O35393 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Efnb3O35393 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Efnb3O35393 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Efnb3O35393 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Efnb3O35393 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
Efnb3O35393 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Efnb3O35393 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Efnb3O35393 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Efnb3O35393 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Efnb3O35393 Mir1895-201ENSMUST00000122615 79 ntBASIC10.75□□□□□ -0.69
Efnb3O35393 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC10.75□□□□□ -0.69
Efnb3O35393 Gm11025-201ENSMUST00000140773 466 ntBASIC10.75□□□□□ -0.69
Efnb3O35393 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Efnb3O35393 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Efnb3O35393 Gm25911-201ENSMUST00000157621 56 ntBASIC10.75□□□□□ -0.69
Efnb3O35393 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Efnb3O35393 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Efnb3O35393 Gm18737-201ENSMUST00000173594 937 ntBASIC10.75□□□□□ -0.69
Efnb3O35393 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Efnb3O35393 Gm27397-201ENSMUST00000184997 107 ntBASIC10.75□□□□□ -0.69
Efnb3O35393 Ighv8-7-201ENSMUST00000194349 297 ntBASIC10.75□□□□□ -0.69
Efnb3O35393 AA619741-201ENSMUST00000195095 646 ntBASIC10.75□□□□□ -0.69
Efnb3O35393 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC10.75□□□□□ -0.69
Efnb3O35393 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Efnb3O35393 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC10.75□□□□□ -0.69
Efnb3O35393 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC10.75□□□□□ -0.69
Efnb3O35393 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Efnb3O35393 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Efnb3O35393 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Efnb3O35393 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Efnb3O35393 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Efnb3O35393 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Efnb3O35393 Gm42934-201ENSMUST00000196920 1345 ntBASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms