Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Polr1aO35134 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC20.54■□□□□ 0.88
Polr1aO35134 Nsd1-205ENSMUST00000224693 852 ntBASIC20.54■□□□□ 0.88
Polr1aO35134 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Polr1aO35134 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Polr1aO35134 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Polr1aO35134 CT009713.10-201ENSMUST00000225013 1986 ntBASIC20.54■□□□□ 0.88
Polr1aO35134 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Polr1aO35134 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Polr1aO35134 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Polr1aO35134 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Polr1aO35134 Gm38157-201ENSMUST00000194178 1698 ntBASIC20.54■□□□□ 0.88
Polr1aO35134 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Polr1aO35134 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Polr1aO35134 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Polr1aO35134 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Polr1aO35134 Gm14109-201ENSMUST00000118814 309 ntBASIC20.53■□□□□ 0.88
Polr1aO35134 Gm13875-201ENSMUST00000120162 282 ntBASIC20.53■□□□□ 0.88
Polr1aO35134 Gm25732-201ENSMUST00000175168 60 ntBASIC20.53■□□□□ 0.88
Polr1aO35134 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC20.53■□□□□ 0.88
Polr1aO35134 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Polr1aO35134 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Polr1aO35134 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Polr1aO35134 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Polr1aO35134 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Polr1aO35134 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Polr1aO35134 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Polr1aO35134 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Polr1aO35134 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Polr1aO35134 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Polr1aO35134 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Polr1aO35134 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Polr1aO35134 Gm43416-201ENSMUST00000201916 1015 ntBASIC20.53■□□□□ 0.88
Polr1aO35134 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Polr1aO35134 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Polr1aO35134 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Polr1aO35134 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Polr1aO35134 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Polr1aO35134 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Polr1aO35134 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Polr1aO35134 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Polr1aO35134 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Polr1aO35134 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Polr1aO35134 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Polr1aO35134 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Polr1aO35134 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Polr1aO35134 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Polr1aO35134 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Polr1aO35134 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Polr1aO35134 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Polr1aO35134 Gm14028-201ENSMUST00000117434 479 ntBASIC20.52■□□□□ 0.88
Polr1aO35134 Gm12502-201ENSMUST00000120197 444 ntBASIC20.52■□□□□ 0.88
Polr1aO35134 Gm12291-201ENSMUST00000121627 311 ntBASIC20.52■□□□□ 0.88
Polr1aO35134 Gm23363-201ENSMUST00000175024 79 ntBASIC20.52■□□□□ 0.88
Polr1aO35134 Gm27046-201ENSMUST00000182160 463 ntBASIC20.52■□□□□ 0.88
Polr1aO35134 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC20.52■□□□□ 0.88
Polr1aO35134 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Polr1aO35134 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Polr1aO35134 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Polr1aO35134 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Polr1aO35134 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC20.52■□□□□ 0.87
Polr1aO35134 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Polr1aO35134 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC20.52■□□□□ 0.87
Polr1aO35134 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC20.51■□□□□ 0.87
Polr1aO35134 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
Polr1aO35134 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Polr1aO35134 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Polr1aO35134 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Polr1aO35134 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Polr1aO35134 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Polr1aO35134 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Polr1aO35134 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC20.51■□□□□ 0.87
Polr1aO35134 Gm8908-201ENSMUST00000121633 1024 ntBASIC20.51■□□□□ 0.87
Polr1aO35134 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Polr1aO35134 AC166095.1-201ENSMUST00000223731 1241 ntBASIC20.51■□□□□ 0.87
Polr1aO35134 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Polr1aO35134 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Polr1aO35134 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Polr1aO35134 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Polr1aO35134 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Polr1aO35134 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Polr1aO35134 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Polr1aO35134 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Polr1aO35134 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Polr1aO35134 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Polr1aO35134 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Polr1aO35134 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Polr1aO35134 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Polr1aO35134 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Polr1aO35134 Gm27341-201ENSMUST00000183570 106 ntBASIC20.5■□□□□ 0.87
Polr1aO35134 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Polr1aO35134 Gm19963-201ENSMUST00000208413 1255 ntBASIC20.5■□□□□ 0.87
Polr1aO35134 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Polr1aO35134 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Polr1aO35134 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
Polr1aO35134 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Polr1aO35134 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Polr1aO35134 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Polr1aO35134 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Polr1aO35134 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms