Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hdac1O09106 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hdac1O09106 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hdac1O09106 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hdac1O09106 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hdac1O09106 AC116503.1-201ENSMUST00000215445 2192 ntBASIC16.21■□□□□ 0.19
Hdac1O09106 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
Hdac1O09106 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hdac1O09106 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Hdac1O09106 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Hdac1O09106 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Hdac1O09106 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Hdac1O09106 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Hdac1O09106 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Hdac1O09106 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Hdac1O09106 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Hdac1O09106 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Hdac1O09106 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Hdac1O09106 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hdac1O09106 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hdac1O09106 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Hdac1O09106 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hdac1O09106 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hdac1O09106 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Hdac1O09106 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.2■□□□□ 0.18
Hdac1O09106 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.2■□□□□ 0.18
Hdac1O09106 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.2■□□□□ 0.18
Hdac1O09106 Gm4804-201ENSMUST00000182234 999 ntBASIC16.2■□□□□ 0.18
Hdac1O09106 Gm27533-201ENSMUST00000183800 152 ntBASIC16.2■□□□□ 0.18
Hdac1O09106 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.2■□□□□ 0.18
Hdac1O09106 Gm9229-201ENSMUST00000222777 126 ntBASIC16.2■□□□□ 0.18
Hdac1O09106 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hdac1O09106 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hdac1O09106 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hdac1O09106 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC16.2■□□□□ 0.18
Hdac1O09106 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hdac1O09106 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hdac1O09106 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hdac1O09106 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hdac1O09106 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac1O09106 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac1O09106 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac1O09106 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac1O09106 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac1O09106 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac1O09106 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac1O09106 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac1O09106 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac1O09106 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac1O09106 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.19■□□□□ 0.18
Hdac1O09106 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac1O09106 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac1O09106 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac1O09106 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Hdac1O09106 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.19■□□□□ 0.18
Hdac1O09106 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac1O09106 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Hdac1O09106 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.19■□□□□ 0.18
Hdac1O09106 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac1O09106 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac1O09106 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac1O09106 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac1O09106 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac1O09106 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac1O09106 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac1O09106 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac1O09106 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac1O09106 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac1O09106 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac1O09106 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac1O09106 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac1O09106 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac1O09106 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC16.19■□□□□ 0.18
Hdac1O09106 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac1O09106 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac1O09106 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac1O09106 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hdac1O09106 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Hdac1O09106 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hdac1O09106 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hdac1O09106 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hdac1O09106 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hdac1O09106 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hdac1O09106 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hdac1O09106 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hdac1O09106 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hdac1O09106 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hdac1O09106 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hdac1O09106 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hdac1O09106 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.18■□□□□ 0.18
Hdac1O09106 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hdac1O09106 Gm24158-201ENSMUST00000175263 71 ntBASIC16.18■□□□□ 0.18
Hdac1O09106 Gm8000-201ENSMUST00000188378 592 ntBASIC16.18■□□□□ 0.18
Hdac1O09106 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.18■□□□□ 0.18
Hdac1O09106 Gm5779-201ENSMUST00000218467 910 ntBASIC16.18■□□□□ 0.18
Hdac1O09106 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC16.18■□□□□ 0.18
Hdac1O09106 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Hdac1O09106 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hdac1O09106 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Hdac1O09106 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms