Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Mir686-201ENSMUST00000102174 109 ntBASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Gm25261-201ENSMUST00000157416 134 ntBASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Gm16379-201ENSMUST00000161469 348 ntBASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Gm27501-201ENSMUST00000183599 107 ntBASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Gm8762-201ENSMUST00000193486 339 ntBASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11236J3QMS7 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Gm11637-201ENSMUST00000120601 592 ntBASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Gm43133-201ENSMUST00000197472 463 ntBASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Gm3961-201ENSMUST00000204425 994 ntBASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.16□□□□□ -0.14
Gm11236J3QMS7 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11236J3QMS7 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gm11236J3QMS7 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm11236J3QMS7 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gm11236J3QMS7 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm11236J3QMS7 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm11236J3QMS7 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm11236J3QMS7 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gm11236J3QMS7 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm11236J3QMS7 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms