Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gm3727J3QM54 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gm3727J3QM54 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Gm3727J3QM54 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Gm3727J3QM54 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gm3727J3QM54 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm3727J3QM54 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Gm3727J3QM54 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm3727J3QM54 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.54□□□□□ -0.56
Gm3727J3QM54 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.54□□□□□ -0.56
Gm3727J3QM54 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Gm3727J3QM54 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm3727J3QM54 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm3727J3QM54 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Gm3727J3QM54 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm3727J3QM54 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm3727J3QM54 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Gm3727J3QM54 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Gm3727J3QM54 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.54□□□□□ -0.56
Gm3727J3QM54 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm3727J3QM54 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm3727J3QM54 Gm15957-201ENSMUST00000118893 974 ntBASIC11.54□□□□□ -0.56
Gm3727J3QM54 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Gm3727J3QM54 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm3727J3QM54 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Gm3727J3QM54 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm3727J3QM54 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.54□□□□□ -0.56
Gm3727J3QM54 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC11.54□□□□□ -0.56
Gm3727J3QM54 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm3727J3QM54 CT025626.1-201ENSMUST00000223735 1455 ntBASIC11.54□□□□□ -0.56
Gm3727J3QM54 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Gm3727J3QM54 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm3727J3QM54 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm3727J3QM54 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm3727J3QM54 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm3727J3QM54 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm3727J3QM54 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm3727J3QM54 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm3727J3QM54 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm3727J3QM54 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.54□□□□□ -0.56
Gm3727J3QM54 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm3727J3QM54 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Gm3727J3QM54 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.54□□□□□ -0.56
Gm3727J3QM54 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Gm3727J3QM54 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm3727J3QM54 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm3727J3QM54 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Gm3727J3QM54 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.54□□□□□ -0.56
Gm3727J3QM54 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.53□□□□□ -0.56
Gm3727J3QM54 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm3727J3QM54 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Gm3727J3QM54 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm3727J3QM54 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.53□□□□□ -0.56
Gm3727J3QM54 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Gm3727J3QM54 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm3727J3QM54 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm3727J3QM54 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm3727J3QM54 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm3727J3QM54 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Gm3727J3QM54 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Gm3727J3QM54 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm3727J3QM54 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm3727J3QM54 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm3727J3QM54 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm3727J3QM54 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm3727J3QM54 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Gm3727J3QM54 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Gm3727J3QM54 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.53□□□□□ -0.56
Gm3727J3QM54 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Gm3727J3QM54 Gm6550-201ENSMUST00000187574 993 ntBASIC11.53□□□□□ -0.56
Gm3727J3QM54 Gm29741-201ENSMUST00000192667 421 ntBASIC11.53□□□□□ -0.56
Gm3727J3QM54 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC11.53□□□□□ -0.56
Gm3727J3QM54 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.53□□□□□ -0.56
Gm3727J3QM54 Klk2-ps-201ENSMUST00000205342 571 ntBASIC11.53□□□□□ -0.56
Gm3727J3QM54 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC11.53□□□□□ -0.56
Gm3727J3QM54 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC11.53□□□□□ -0.56
Gm3727J3QM54 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm3727J3QM54 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm3727J3QM54 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm3727J3QM54 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm3727J3QM54 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm3727J3QM54 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm3727J3QM54 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm3727J3QM54 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm3727J3QM54 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm3727J3QM54 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm3727J3QM54 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm3727J3QM54 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm3727J3QM54 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.53□□□□□ -0.56
Gm3727J3QM54 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm3727J3QM54 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm3727J3QM54 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Gm3727J3QM54 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.52□□□□□ -0.56
Gm3727J3QM54 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Gm3727J3QM54 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Gm3727J3QM54 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Gm3727J3QM54 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC11.52□□□□□ -0.56
Gm3727J3QM54 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Gm3727J3QM54 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Gm3727J3QM54 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms