Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.98□□□□□ -0.17
Pcdh9F8VPK8 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh9F8VPK8 Gm5425-201ENSMUST00000214125 459 ntBASIC13.98□□□□□ -0.17
Pcdh9F8VPK8 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh9F8VPK8 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Pcdh9F8VPK8 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.98□□□□□ -0.17
Pcdh9F8VPK8 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh9F8VPK8 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh9F8VPK8 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh9F8VPK8 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh9F8VPK8 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh9F8VPK8 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh9F8VPK8 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh9F8VPK8 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Pcdh9F8VPK8 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Pcdh9F8VPK8 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.98□□□□□ -0.17
Pcdh9F8VPK8 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh9F8VPK8 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh9F8VPK8 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh9F8VPK8 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh9F8VPK8 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh9F8VPK8 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.97□□□□□ -0.17
Pcdh9F8VPK8 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.96□□□□□ -0.17
Pcdh9F8VPK8 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Pcdh9F8VPK8 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
Pcdh9F8VPK8 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh9F8VPK8 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Pcdh9F8VPK8 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Pcdh9F8VPK8 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh9F8VPK8 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh9F8VPK8 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh9F8VPK8 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh9F8VPK8 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.96□□□□□ -0.17
Pcdh9F8VPK8 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh9F8VPK8 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh9F8VPK8 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh9F8VPK8 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh9F8VPK8 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh9F8VPK8 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh9F8VPK8 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh9F8VPK8 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Pcdh9F8VPK8 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh9F8VPK8 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Pcdh9F8VPK8 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.96□□□□□ -0.17
Pcdh9F8VPK8 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh9F8VPK8 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh9F8VPK8 Gm24420-201ENSMUST00000176676 59 ntBASIC13.96□□□□□ -0.17
Pcdh9F8VPK8 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh9F8VPK8 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh9F8VPK8 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Pcdh9F8VPK8 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh9F8VPK8 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh9F8VPK8 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh9F8VPK8 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh9F8VPK8 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh9F8VPK8 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh9F8VPK8 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.96□□□□□ -0.18
Pcdh9F8VPK8 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh9F8VPK8 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh9F8VPK8 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh9F8VPK8 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms