Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhb9E9Q5G2 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhb9E9Q5G2 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhb9E9Q5G2 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb9E9Q5G2 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb9E9Q5G2 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb9E9Q5G2 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb9E9Q5G2 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhb9E9Q5G2 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb9E9Q5G2 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb9E9Q5G2 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdhb9E9Q5G2 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb9E9Q5G2 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb9E9Q5G2 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb9E9Q5G2 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhb9E9Q5G2 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb9E9Q5G2 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb9E9Q5G2 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb9E9Q5G2 Gm11400-201ENSMUST00000120853 1214 ntBASIC15.97■□□□□ 0.15
Pcdhb9E9Q5G2 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdhb9E9Q5G2 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC15.97■□□□□ 0.15
Pcdhb9E9Q5G2 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb9E9Q5G2 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb9E9Q5G2 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb9E9Q5G2 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb9E9Q5G2 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Pcdhb9E9Q5G2 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb9E9Q5G2 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb9E9Q5G2 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb9E9Q5G2 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb9E9Q5G2 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb9E9Q5G2 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC15.97■□□□□ 0.15
Pcdhb9E9Q5G2 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb9E9Q5G2 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb9E9Q5G2 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC15.96■□□□□ 0.15
Pcdhb9E9Q5G2 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.96■□□□□ 0.15
Pcdhb9E9Q5G2 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb9E9Q5G2 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Pcdhb9E9Q5G2 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb9E9Q5G2 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Pcdhb9E9Q5G2 Gm9816-201ENSMUST00000122292 1414 ntBASIC15.96■□□□□ 0.15
Pcdhb9E9Q5G2 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb9E9Q5G2 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Pcdhb9E9Q5G2 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb9E9Q5G2 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb9E9Q5G2 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Pcdhb9E9Q5G2 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb9E9Q5G2 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC15.96■□□□□ 0.15
Pcdhb9E9Q5G2 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.96■□□□□ 0.15
Pcdhb9E9Q5G2 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb9E9Q5G2 Gm8602-201ENSMUST00000184045 607 ntBASIC15.96■□□□□ 0.15
Pcdhb9E9Q5G2 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb9E9Q5G2 Itm2b-204ENSMUST00000228637 783 ntBASIC15.96■□□□□ 0.15
Pcdhb9E9Q5G2 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Pcdhb9E9Q5G2 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb9E9Q5G2 Gm10012-201ENSMUST00000078252 192 ntBASIC15.96■□□□□ 0.15
Pcdhb9E9Q5G2 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb9E9Q5G2 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb9E9Q5G2 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.96■□□□□ 0.15
Pcdhb9E9Q5G2 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.96■□□□□ 0.15
Pcdhb9E9Q5G2 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Pcdhb9E9Q5G2 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb9E9Q5G2 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb9E9Q5G2 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb9E9Q5G2 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Pcdhb9E9Q5G2 Gm8131-201ENSMUST00000213783 1570 ntBASIC15.96■□□□□ 0.14
Pcdhb9E9Q5G2 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhb9E9Q5G2 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb9E9Q5G2 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb9E9Q5G2 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.95■□□□□ 0.14
Pcdhb9E9Q5G2 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.95■□□□□ 0.14
Pcdhb9E9Q5G2 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Pcdhb9E9Q5G2 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb9E9Q5G2 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms